Analysis of interatomic Contacts of Structural Units in PDB entry:
3L24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L24 entry

There are 3 chains in PDB entry 3L24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 440
B
 MET 1ARG 440
C
 MET 1ARG 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 54 helices in PDB entry 3L24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 26Right-handed alpha
Helix 2
2
A
53 58Right-handed alpha
Helix 3
3
A
98 104Right-handed 310
Helix 4
4
A
111 119Right-handed 310
Helix 5
5
A
132 140Right-handed alpha
Helix 6
6
A
146 158Right-handed alpha
Helix 7
7
A
161 188Right-handed alpha
Helix 8
8
A
191 204Right-handed alpha
Helix 9
9
A
206 210Right-handed 310
Helix 10
10
A
220 224Right-handed 310
Helix 11
11
A
266 284Right-handed alpha
Helix 12
12
A
291 310Right-handed alpha
Helix 13
13
A
316 323Right-handed alpha
Helix 14
14
A
325 329Right-handed 310
Helix 15
15
A
387 396Right-handed alpha
Helix 16
16
A
397 403Right-handed 310
Helix 17
17
A
404 412Right-handed alpha
Helix 18
18
A
433 437Right-handed alpha
Helix 19
19
B
2 27Right-handed alpha
Helix 20
20
B
53 58Right-handed alpha
Helix 21
21
B
100 104Right-handed 310
Helix 22
22
B
111 119Right-handed 310
Helix 23
23
B
122 124Right-handed 310
Helix 24
24
B
132 138Right-handed alpha
Helix 25
25
B
146 157Right-handed alpha
Helix 26
26
B
161 188Right-handed alpha
Helix 27
27
B
191 204Right-handed alpha
Helix 28
28
B
206 210Right-handed 310
Helix 29
29
B
220 224Right-handed 310
Helix 30
30
B
266 284Right-handed alpha
Helix 31
31
B
291 310Right-handed alpha
Helix 32
32
B
316 323Right-handed alpha
Helix 33
33
B
325 329Right-handed 310
Helix 34
34
B
387 396Right-handed alpha
Helix 35
35
B
397 402Right-handed 310
Helix 36
36
B
404 412Right-handed alpha
Helix 37
37
B
433 437Right-handed alpha
Helix 38
38
C
2 26Right-handed alpha
Helix 39
39
C
53 58Right-handed alpha
Helix 40
40
C
98 104Right-handed 310
Helix 41
41
C
111 116Right-handed 310
Helix 42
42
C
122 124Right-handed 310
Helix 43
43
C
132 139Right-handed alpha
Helix 44
44
C
146 158Right-handed alpha
Helix 45
45
C
161 188Right-handed alpha
Helix 46
46
C
191 204Right-handed alpha
Helix 47
47
C
220 224Right-handed 310
Helix 48
48
C
266 284Right-handed alpha
Helix 49
49
C
291 310Right-handed alpha
Helix 50
50
C
316 324Right-handed alpha
Helix 51
51
C
325 329Right-handed 310
Helix 52
52
C
387 395Right-handed alpha
Helix 53
53
C
404 412Right-handed alpha
Helix 54
54
C
433 437Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 3L24. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
79 83parallel
Strand 3
A
69 72anti-parallel
Strand 4
A
30 34anti-parallel
Strand 5
A
126 129parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
240 249anti-parallel
Strand 3
A
252 261anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 380first strand
Strand 2
A
421 425anti-parallel
Strand 3
A
430 432anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 385first strand
Strand 2
A
416 418anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 109first strand
Strand 2
B
79 83parallel
Strand 3
B
69 72anti-parallel
Strand 4
B
30 34anti-parallel
Strand 5
B
126 129parallel
Strand 6
B
143 144parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 218first strand
Strand 2
B
240 249anti-parallel
Strand 3
B
252 261anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
376 380first strand
Strand 2
B
421 425anti-parallel
Strand 3
B
430 432anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 385first strand
Strand 2
B
416 418anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
105 109first strand
Strand 2
C
79 83parallel
Strand 3
C
69 72anti-parallel
Strand 4
C
30 34anti-parallel
Strand 5
C
126 129parallel
Strand 6
C
143 144parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
215 218first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
256 261anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
248 249first strand
Strand 2
C
252 253anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
335 337first strand
Strand 2
C
376 380anti-parallel
Strand 3
C
421 425anti-parallel
Strand 4
C
430 432anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
383 385first strand
Strand 2
C
416 418anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il