Analysis of interatomic Contacts of Structural Units in PDB entry:
3L5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L5Z entry

There are 2 chains in PDB entry 3L5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 96THR 238
B
 SER 96THR 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3L5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 119Right-handed alpha
Helix 2
2
A
155 160Right-handed alpha
Helix 3
3
A
163 171Right-handed alpha
Helix 4
4
A
189 196Right-handed alpha
Helix 5
5
A
228 231Right-handed 310
Helix 6
6
B
111 119Right-handed alpha
Helix 7
7
B
155 162Right-handed alpha
Helix 8
8
B
163 171Right-handed alpha
Helix 9
9
B
189 197Right-handed alpha
Helix 10
10
B
228 231Right-handed 310
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There are 2 sheets in PDB entry 3L5Z. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 109first strand
Strand 2
A
125 135anti-parallel
Strand 3
A
138 148anti-parallel
Strand 4
A
218 226anti-parallel
Strand 5
A
204 213anti-parallel
Strand 6
A
176 186anti-parallel
Strand 7
B
233 237anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 237first strand
Strand 2
B
176 186anti-parallel
Strand 3
B
204 213anti-parallel
Strand 4
B
218 226anti-parallel
Strand 5
B
138 148anti-parallel
Strand 6
B
125 135anti-parallel
Strand 7
B
98 109anti-parallel
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