Analysis of interatomic Contacts of Structural Units in PDB entry:
3L6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L6H entry

There is 1 chain in PDB entry 3L6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 320LYS 573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3L6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
330 347Right-handed alpha
Helix 2
2
A
357 367Right-handed alpha
Helix 3
3
A
382 390Right-handed alpha
Helix 4
4
A
417 421Right-handed 310
Helix 5
5
A
423 426Right-handed 310
Helix 6
6
A
436 449Right-handed alpha
Helix 7
7
A
450 453Right-handed 310
Helix 8
8
A
461 476Right-handed alpha
Helix 9
9
A
487 492Right-handed 310
Helix 10
10
A
518 523Right-handed alpha
Helix 11
11
A
523 533Right-handed alpha
Helix 12
12
A
536 549Right-handed alpha
Helix 13
13
A
552 564Right-handed alpha
Helix 14
14
A
564 570Right-handed alpha
Helix 15
15
A
571 573Right-handed 310
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There are 4 sheets in PDB entry 3L6H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 327first strand
Strand 2
A
350 355parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
509 516anti-parallel
Strand 3
A
393 410anti-parallel
Strand 4
A
481 485anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
509 516anti-parallel
Strand 3
A
393 410anti-parallel
Strand 4
A
495 497anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 430first strand
Strand 2
A
456 458parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il