Analysis of interatomic Contacts of Structural Units in PDB entry:
3L6R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L6R entry

There are 2 chains in PDB entry 3L6R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3PHE 55
A
 ILE 57ALA 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3L6R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 20Right-handed alpha
Helix 2
2
A
21 23Right-handed 310
Helix 3
3
A
31 39Right-handed alpha
Helix 4
4
A
48 55Right-handed 310
Helix 5
5
A
56 67Right-handed alpha
Helix 6
6
A
85 98Right-handed alpha
Helix 7
7
A
111 121Right-handed alpha
Helix 8
8
A
131 147Right-handed alpha
Helix 9
9
A
156 164Right-handed alpha
Helix 10
10
A
164 174Right-handed alpha
Helix 11
11
A
187 201Right-handed alpha
Helix 12
12
A
215 224Right-handed alpha
Helix 13
13
A
237 241Right-handed 310
Helix 14
14
A
247 256Right-handed alpha
Helix 15
15
A
263 279Right-handed alpha
Helix 16
16
A
283 285Right-handed 310
Helix 17
17
A
286 295Right-handed alpha
Helix 18
18
A
296 301Right-handed 310
Helix 19
19
A
318 323Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3L6R. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
41 46anti-parallel
Strand 3
A
307 312parallel
Strand 4
A
179 183parallel
Strand 5
A
205 211parallel
Strand 6
A
258 262parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 128first strand
Strand 2
A
102 107parallel
Strand 3
A
79 82parallel
Strand 4
A
149 150parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il