Analysis of interatomic Contacts of Structural Units in PDB entry:
3L6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L6V entry

There are 2 chains in PDB entry 3L6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 530LEU 877
B
 MET 530ALA 875
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3L6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
553 559Right-handed alpha
Helix 2
2
A
604 606Right-handed 310
Helix 3
3
A
619 621Right-handed 310
Helix 4
4
A
660 663Right-handed 310
Helix 5
5
A
708 710Right-handed 310
Helix 6
6
A
793 795Right-handed 310
Helix 7
7
A
844 846Right-handed 310
Helix 8
8
B
553 559Right-handed alpha
Helix 9
9
B
570 574Right-handed 310
Helix 10
10
B
604 606Right-handed 310
Helix 11
11
B
619 621Right-handed 310
Helix 12
12
B
660 663Right-handed 310
Helix 13
13
B
708 710Right-handed 310
Helix 14
14
B
793 795Right-handed 310
Helix 15
15
B
844 846Right-handed 310
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There are 12 sheets in PDB entry 3L6V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
577 583first strand
Strand 2
A
538 543anti-parallel
Strand 3
A
547 552anti-parallel
Strand 4
A
616 617anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
567 570first strand
Strand 2
A
838 842anti-parallel
Strand 3
A
828 833anti-parallel
Strand 4
A
867 873anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 636first strand
Strand 2
A
588 593anti-parallel
Strand 3
A
597 602anti-parallel
Strand 4
A
670 671anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
681 687first strand
Strand 2
A
644 649anti-parallel
Strand 3
A
653 658anti-parallel
Strand 4
A
720 721anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
731 737first strand
Strand 2
A
692 697anti-parallel
Strand 3
A
701 706anti-parallel
Strand 4
A
805 806anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
817 823first strand
Strand 2
A
777 782anti-parallel
Strand 3
A
786 791anti-parallel
Strand 4
A
856 857anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
577 583first strand
Strand 2
B
538 543anti-parallel
Strand 3
B
547 552anti-parallel
Strand 4
B
616 617anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
630 636first strand
Strand 2
B
588 593anti-parallel
Strand 3
B
597 602anti-parallel
Strand 4
B
670 671anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
681 687first strand
Strand 2
B
644 649anti-parallel
Strand 3
B
653 658anti-parallel
Strand 4
B
720 721anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
731 737first strand
Strand 2
B
692 697anti-parallel
Strand 3
B
701 706anti-parallel
Strand 4
B
805 806anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
817 823first strand
Strand 2
B
777 782anti-parallel
Strand 3
B
786 791anti-parallel
Strand 4
B
856 857anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
838 842first strand
Strand 2
B
828 833anti-parallel
Strand 3
B
867 873anti-parallel
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