Analysis of interatomic Contacts of Structural Units in PDB entry:
3L82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L82 entry

There are 2 chains in PDB entry 3L82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 64SER 266
B
 VAL 164LYS 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3L82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 93Right-handed alpha
Helix 2
2
A
94 111Right-handed alpha
Helix 3
3
A
116 133Right-handed alpha
Helix 4
4
A
149 161Right-handed alpha
Helix 5
5
A
165 186Right-handed alpha
Helix 6
6
A
189 201Right-handed alpha
Helix 7
7
A
210 220Right-handed alpha
Helix 8
8
A
224 229Right-handed alpha
Helix 9
9
A
232 252Right-handed alpha
Helix 10
10
A
254 266Right-handed alpha
Helix 11
11
B
183 187Right-handed 310
Helix 12
12
B
192 199Right-handed alpha
Helix 13
13
B
209 213Right-handed 310
Helix 14
14
B
278 286Right-handed alpha
Helix 15
15
B
302 314Right-handed alpha
Helix 16
16
B
340 348Right-handed alpha
Helix 17
17
B
349 354Right-handed 310
Helix 18
18
B
369 378Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3L82.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
B
357 363anti-parallel
Strand 3
B
325 331parallel
Strand 4
B
288 294parallel
Strand 5
B
178 182parallel
Strand 6
B
230 235parallel
Strand 7
B
221 224anti-parallel
Strand 8
B
206 207anti-parallel
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