Analysis of interatomic Contacts of Structural Units in PDB entry:
3LCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LCC entry

There is 1 chain in PDB entry 3LCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13LEU 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3LCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 42Right-handed alpha
Helix 2
2
A
53 62Right-handed alpha
Helix 3
3
A
78 85Right-handed alpha
Helix 4
4
A
97 109Right-handed alpha
Helix 5
5
A
111 115Right-handed 310
Helix 6
6
A
146 148Right-handed 310
Helix 7
7
A
149 160Right-handed alpha
Helix 8
8
A
186 195Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3LCC.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
89 94parallel
Strand 3
A
68 73parallel
Strand 4
A
133 139parallel
Strand 5
A
161 171parallel
Strand 6
A
219 225anti-parallel
Strand 7
A
199 206anti-parallel
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