Analysis of interatomic Contacts of Structural Units in PDB entry:
3LCO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LCO entry

There is 1 chain in PDB entry 3LCO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 551GLN 915
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3LCO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
572 576Right-handed 310
Helix 2
2
A
578 580Right-handed 310
Helix 3
3
A
623 641Right-handed alpha
Helix 4
4
A
671 684Right-handed alpha
Helix 5
5
A
751 772Right-handed alpha
Helix 6
6
A
802 806Right-handed 310
Helix 7
7
A
820 822Right-handed 310
Helix 8
8
A
823 828Right-handed alpha
Helix 9
9
A
833 849Right-handed alpha
Helix 10
10
A
862 872Right-handed alpha
Helix 11
11
A
882 893Right-handed alpha
Helix 12
12
A
896 900Right-handed 310
Helix 13
13
A
902 915Right-handed alpha
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There are 3 sheets in PDB entry 3LCO. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 590first strand
Strand 2
A
594 604anti-parallel
Strand 3
A
609 618anti-parallel
Strand 4
A
660 663anti-parallel
Strand 5
A
649 653anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
669 670first strand
Strand 2
A
784 787anti-parallel
Strand 3
A
791 794anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 810first strand
Strand 2
A
817 818anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il