Analysis of interatomic Contacts of Structural Units in PDB entry:
3LCV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LCV entry

There is 1 chain in PDB entry 3LCV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 8GLN 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3LCV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
8 18Right-handed alpha
Helix 2
2
B
27 42Right-handed alpha
Helix 3
3
B
45 61Right-handed alpha
Helix 4
4
B
62 65Right-handed 310
Helix 5
5
B
71 84Right-handed alpha
Helix 6
6
B
87 100Right-handed alpha
Helix 7
7
B
102 109Right-handed alpha
Helix 8
8
B
111 120Right-handed alpha
Helix 9
9
B
121 123Right-handed 310
Helix 10
10
B
136 140Right-handed 310
Helix 11
11
B
158 172Right-handed alpha
Helix 12
12
B
200 208Right-handed alpha
Helix 13
13
B
210 219Right-handed alpha
Helix 14
14
B
239 256Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3LCV.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 180first strand
Strand 2
B
151 156parallel
Strand 3
B
128 131parallel
Strand 4
B
194 197parallel
Strand 5
B
223 229parallel
Strand 6
B
267 273anti-parallel
Strand 7
B
258 264anti-parallel
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