Analysis of interatomic Contacts of Structural Units in PDB entry:
3LFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LFU entry

There is 1 chain in PDB entry 3LFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3ARG 647
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3LFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 8Right-handed alpha
Helix 2
2
A
11 19Right-handed alpha
Helix 3
3
A
34 49Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
63 79Right-handed alpha
Helix 6
6
A
90 101Right-handed alpha
Helix 7
7
A
102 106Right-handed 310
Helix 8
8
A
115 130Right-handed alpha
Helix 9
9
A
138 152Right-handed alpha
Helix 10
10
A
165 185Right-handed alpha
Helix 11
11
A
189 203Right-handed alpha
Helix 12
12
A
203 214Right-handed alpha
Helix 13
13
A
221 225Right-handed 310
Helix 14
14
A
226 238Right-handed alpha
Helix 15
15
A
248 252Right-handed 310
Helix 16
16
A
254 258Right-handed 310
Helix 17
17
A
262 271Right-handed alpha
Helix 18
18
A
286 298Right-handed alpha
Helix 19
19
A
326 343Right-handed alpha
Helix 20
20
A
346 348Right-handed 310
Helix 21
21
A
356 358Right-handed 310
Helix 22
22
A
359 370Right-handed alpha
Helix 23
23
A
381 384Right-handed 310
Helix 24
24
A
385 400Right-handed alpha
Helix 25
25
A
403 411Right-handed alpha
Helix 26
26
A
419 433Right-handed alpha
Helix 27
27
A
436 447Right-handed alpha
Helix 28
28
A
451 472Right-handed alpha
Helix 29
29
A
476 488Right-handed alpha
Helix 30
30
A
489 496Right-handed alpha
Helix 31
31
A
499 520Right-handed alpha
Helix 32
32
A
529 541Right-handed alpha
Helix 33
33
A
560 563Right-handed 310
Helix 34
34
A
591 604Right-handed alpha
Helix 35
35
A
630 636Right-handed alpha
Helix 36
36
A
637 639Right-handed 310
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There are 4 sheets in PDB entry 3LFU. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
57 61parallel
Strand 3
A
216 219parallel
Strand 4
A
242 247parallel
Strand 5
A
25 29parallel
Strand 6
A
275 279parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
186 188parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
554 558parallel
Strand 3
A
350 354parallel
Strand 4
A
567 572parallel
Strand 5
A
606 620parallel
Strand 6
A
623 626anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
554 558parallel
Strand 3
A
350 354parallel
Strand 4
A
567 572parallel
Strand 5
A
606 620parallel
Strand 6
A
318 325parallel
Strand 7
A
641 643parallel
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