Analysis of interatomic Contacts of Structural Units in PDB entry:
3LG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LG3 entry

There are 2 chains in PDB entry 3LG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 1GLY 419
B
THR 2GLY 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3LG3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 16Right-handed alpha
Helix 2
2
A
17 22Right-handed 310
Helix 3
3
A
29 36Right-handed alpha
Helix 4
4
A
44 59Right-handed alpha
Helix 5
5
A
74 85Right-handed alpha
Helix 6
6
A
92 100Right-handed alpha
Helix 7
7
A
116 139Right-handed alpha
Helix 8
8
A
165 180Right-handed alpha
Helix 9
9
A
190 194Right-handed 310
Helix 10
10
A
206 225Right-handed alpha
Helix 11
11
A
247 252Right-handed 310
Helix 12
12
A
269 281Right-handed alpha
Helix 13
13
A
282 284Right-handed 310
Helix 14
14
A
295 310Right-handed alpha
Helix 15
15
A
324 329Right-handed alpha
Helix 16
16
A
330 344Right-handed alpha
Helix 17
17
A
353 373Right-handed alpha
Helix 18
18
A
374 383Right-handed alpha
Helix 19
19
A
383 389Right-handed alpha
Helix 20
20
A
390 394Right-handed 310
Helix 21
21
A
399 404Right-handed alpha
Helix 22
22
A
405 418Right-handed alpha
Helix 23
23
B
4 16Right-handed alpha
Helix 24
24
B
17 22Right-handed 310
Helix 25
25
B
29 36Right-handed alpha
Helix 26
26
B
44 59Right-handed alpha
Helix 27
27
B
74 85Right-handed alpha
Helix 28
28
B
92 100Right-handed alpha
Helix 29
29
B
116 139Right-handed alpha
Helix 30
30
B
165 180Right-handed alpha
Helix 31
31
B
190 194Right-handed 310
Helix 32
32
B
206 225Right-handed alpha
Helix 33
33
B
247 252Right-handed 310
Helix 34
34
B
269 281Right-handed alpha
Helix 35
35
B
295 310Right-handed alpha
Helix 36
36
B
324 329Right-handed alpha
Helix 37
37
B
330 344Right-handed alpha
Helix 38
38
B
353 373Right-handed alpha
Helix 39
39
B
374 383Right-handed alpha
Helix 40
40
B
383 390Right-handed alpha
Helix 41
41
B
391 394Right-handed 310
Helix 42
42
B
399 404Right-handed alpha
Helix 43
43
B
405 418Right-handed alpha
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There are 4 sheets in PDB entry 3LG3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
67 70first strand
Strand 2
A
346 351parallel
Strand 3
A
314 318parallel
Strand 4
A
286 289parallel
Strand 5
A
229 234parallel
Strand 6
A
183 187parallel
Strand 7
A
155 158parallel
Strand 8
A
89 91parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
203 204first strand
Strand 2
A
241 242parallel
Strand 3
A
264 266anti-parallel
Strand 4
A
254 258anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
67 70first strand
Strand 2
B
346 351parallel
Strand 3
B
314 318parallel
Strand 4
B
286 289parallel
Strand 5
B
229 234parallel
Strand 6
B
183 187parallel
Strand 7
B
155 158parallel
Strand 8
B
89 91parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
203 204first strand
Strand 2
B
241 242parallel
Strand 3
B
264 266anti-parallel
Strand 4
B
254 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il