Analysis of interatomic Contacts of Structural Units in PDB entry:
3LH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LH2 entry

There are 12 chains in PDB entry 3LH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
S
 HIS 6LEU 71
H
 VAL 2HIS 132
T
 LEU 7ILE 73
I
 VAL 2HIS 133
V
 LEU 7GLU 74
K
 VAL 2SER 127
L
 ALA 0LEU 109
M
 GLU 1LYS 108
O
 ALA 0LEU 109
U
 LEU 7GLU 74
N
 ALA 0LEU 109
J
 VAL 2SER 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3LH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
S
15 17Right-handed 310
Helix 2
2
S
18 29Right-handed alpha
Helix 3
3
S
55 65Right-handed alpha
Helix 4
4
H
53 56Right-handed 310
Helix 5
5
H
87 91Right-handed 310
Helix 6
6
T
15 17Right-handed 310
Helix 7
7
T
18 29Right-handed alpha
Helix 8
8
T
49 51Right-handed 310
Helix 9
9
T
52 65Right-handed alpha
Helix 10
10
I
53 56Right-handed 310
Helix 11
11
I
87 91Right-handed 310
Helix 12
12
I
128 133Right-handed alpha
Helix 13
13
V
15 17Right-handed 310
Helix 14
14
V
18 28Right-handed alpha
Helix 15
15
V
49 51Right-handed 310
Helix 16
16
V
52 64Right-handed alpha
Helix 17
17
K
62 65Right-handed 310
Helix 18
18
K
87 91Right-handed 310
Helix 19
19
L
29 32Right-handed 310
Helix 20
20
L
80 84Right-handed 310
Helix 21
21
M
29 32Right-handed 310
Helix 22
22
M
80 84Right-handed 310
Helix 23
23
O
29 32Right-handed 310
Helix 24
24
O
80 84Right-handed 310
Helix 25
25
U
15 17Right-handed 310
Helix 26
26
U
18 28Right-handed alpha
Helix 27
27
U
49 51Right-handed 310
Helix 28
28
U
52 63Right-handed alpha
Helix 29
29
N
29 32Right-handed 310
Helix 30
30
N
80 84Right-handed 310
Helix 31
31
J
62 65Right-handed 310
Helix 32
32
J
87 91Right-handed 310
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There are 26 sheets in PDB entry 3LH2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
8 14first strand
Strand 2
S
32 48anti-parallel
Strand 3
V
32 48anti-parallel
Strand 4
S
8 14anti-parallel
Strand 5
V
71 72anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
121 125parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
46 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
121 125parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
109 117anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
8 14first strand
Strand 2
U
32 48anti-parallel
Strand 3
T
32 48anti-parallel
Strand 4
U
8 14anti-parallel
Strand 5
T
71 72anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
3 6first strand
Strand 2
I
18 25anti-parallel
Strand 3
I
78 83anti-parallel
Strand 4
I
68 73anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
10 12first strand
Strand 2
I
121 125parallel
Strand 3
I
92 101anti-parallel
Strand 4
I
34 39anti-parallel
Strand 5
I
46 52anti-parallel
Strand 6
I
57 60anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
10 12first strand
Strand 2
I
121 125parallel
Strand 3
I
92 101anti-parallel
Strand 4
I
110 117anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
3 6first strand
Strand 2
K
18 25anti-parallel
Strand 3
K
78 83anti-parallel
Strand 4
K
68 73anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 12first strand
Strand 2
K
121 125parallel
Strand 3
K
92 101anti-parallel
Strand 4
K
34 39anti-parallel
Strand 5
K
45 52anti-parallel
Strand 6
K
57 60anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 12first strand
Strand 2
K
121 125parallel
Strand 3
K
92 101anti-parallel
Strand 4
K
110 117anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
71 76anti-parallel
Strand 4
L
63 68anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
46 49anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
103 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
98 99anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
4 7first strand
Strand 2
M
19 25anti-parallel
Strand 3
M
71 76anti-parallel
Strand 4
M
63 68anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 13first strand
Strand 2
M
103 107parallel
Strand 3
M
86 91anti-parallel
Strand 4
M
34 39anti-parallel
Strand 5
M
46 49anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 13first strand
Strand 2
M
103 107parallel
Strand 3
M
86 91anti-parallel
Strand 4
M
98 99anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
4 7first strand
Strand 2
O
19 25anti-parallel
Strand 3
O
71 76anti-parallel
Strand 4
O
63 68anti-parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
10 13first strand
Strand 2
O
103 107parallel
Strand 3
O
86 91anti-parallel
Strand 4
O
34 39anti-parallel
Strand 5
O
46 49anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
10 13first strand
Strand 2
O
103 107parallel
Strand 3
O
86 91anti-parallel
Strand 4
O
98 99anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
4 7first strand
Strand 2
N
19 25anti-parallel
Strand 3
N
71 76anti-parallel
Strand 4
N
63 68anti-parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 13first strand
Strand 2
N
103 107parallel
Strand 3
N
86 91anti-parallel
Strand 4
N
34 39anti-parallel
Strand 5
N
46 49anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
10 13first strand
Strand 2
N
103 107parallel
Strand 3
N
86 91anti-parallel
Strand 4
N
98 99anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
3 6first strand
Strand 2
J
18 25anti-parallel
Strand 3
J
78 83anti-parallel
Strand 4
J
68 73anti-parallel
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There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
121 125parallel
Strand 3
J
92 101anti-parallel
Strand 4
J
34 39anti-parallel
Strand 5
J
45 52anti-parallel
Strand 6
J
57 60anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
10 12first strand
Strand 2
J
121 125parallel
Strand 3
J
92 101anti-parallel
Strand 4
J
110 117anti-parallel
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