Analysis of interatomic Contacts of Structural Units in PDB entry:
3LHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LHF entry

There are 4 chains in PDB entry 3LHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 54ASN 192
B
 ARG 54ASN 192
C
 LYS 53ASN 192
D
 LYS 53ASN 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 3LHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 66Right-handed 310
Helix 2
2
A
67 82Right-handed alpha
Helix 3
3
A
100 112Right-handed alpha
Helix 4
4
A
130 140Right-handed alpha
Helix 5
5
A
153 176Right-handed alpha
Helix 6
6
A
178 191Right-handed alpha
Helix 7
7
B
64 66Right-handed 310
Helix 8
8
B
67 82Right-handed alpha
Helix 9
9
B
100 112Right-handed alpha
Helix 10
10
B
130 141Right-handed alpha
Helix 11
11
B
153 175Right-handed alpha
Helix 12
12
B
179 192Right-handed alpha
Helix 13
13
C
64 66Right-handed 310
Helix 14
14
C
67 82Right-handed alpha
Helix 15
15
C
100 112Right-handed alpha
Helix 16
16
C
122 126Right-handed 310
Helix 17
17
C
130 141Right-handed alpha
Helix 18
18
C
153 175Right-handed alpha
Helix 19
19
C
179 191Right-handed alpha
Helix 20
20
D
64 66Right-handed 310
Helix 21
21
D
67 82Right-handed alpha
Helix 22
22
D
100 111Right-handed alpha
Helix 23
23
D
122 127Right-handed alpha
Helix 24
24
D
130 141Right-handed alpha
Helix 25
25
D
153 175Right-handed alpha
Helix 26
26
D
179 192Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3LHF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 92first strand
Strand 2
A
55 62parallel
Strand 3
A
115 120parallel
Strand 4
A
144 147parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 92first strand
Strand 2
B
55 62parallel
Strand 3
B
115 120parallel
Strand 4
B
144 147parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 92first strand
Strand 2
C
55 62parallel
Strand 3
C
115 120parallel
Strand 4
C
144 147parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
87 92first strand
Strand 2
D
55 62parallel
Strand 3
D
115 120parallel
Strand 4
D
144 147parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il