Analysis of interatomic Contacts of Structural Units in PDB entry:
3LHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LHI entry

There is 1 chain in PDB entry 3LHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLU 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3LHI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 33Right-handed alpha
Helix 2
2
A
45 54Right-handed alpha
Helix 3
3
A
58 60Right-handed 310
Helix 4
4
A
79 88Right-handed alpha
Helix 5
5
A
90 96Right-handed 310
Helix 6
6
A
107 111Right-handed 310
Helix 7
7
A
112 124Right-handed alpha
Helix 8
8
A
149 155Right-handed alpha
Helix 9
9
A
178 184Right-handed alpha
Helix 10
10
A
194 206Right-handed alpha
Helix 11
11
A
213 219Right-handed alpha
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There are 2 sheets in PDB entry 3LHI. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
225 230parallel
Strand 3
A
187 193parallel
Strand 4
A
129 132parallel
Strand 5
A
35 39parallel
Strand 6
A
62 66parallel
Strand 7
A
97 98parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
174 177anti-parallel
Strand 3
A
162 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il