Analysis of interatomic Contacts of Structural Units in PDB entry:
3LHK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LHK entry

There are 4 chains in PDB entry 3LHK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 61GLU 206
B
 ALA 62GLU 206
C
 ASN 61ARG 205
D
 ALA 62GLU 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3LHK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 74Right-handed 310
Helix 2
2
A
75 93Right-handed alpha
Helix 3
3
A
111 123Right-handed alpha
Helix 4
4
A
133 138Right-handed alpha
Helix 5
5
A
141 152Right-handed alpha
Helix 6
6
A
166 187Right-handed alpha
Helix 7
7
A
190 205Right-handed alpha
Helix 8
8
B
72 74Right-handed 310
Helix 9
9
B
75 93Right-handed alpha
Helix 10
10
B
111 123Right-handed alpha
Helix 11
11
B
133 137Right-handed 310
Helix 12
12
B
141 152Right-handed alpha
Helix 13
13
B
166 187Right-handed alpha
Helix 14
14
B
190 205Right-handed alpha
Helix 15
15
C
72 74Right-handed 310
Helix 16
16
C
75 94Right-handed alpha
Helix 17
17
C
111 123Right-handed alpha
Helix 18
18
C
133 137Right-handed 310
Helix 19
19
C
141 152Right-handed alpha
Helix 20
20
C
166 187Right-handed alpha
Helix 21
21
C
190 204Right-handed alpha
Helix 22
22
D
72 74Right-handed 310
Helix 23
23
D
75 93Right-handed alpha
Helix 24
24
D
111 123Right-handed alpha
Helix 25
25
D
133 138Right-handed alpha
Helix 26
26
D
141 152Right-handed alpha
Helix 27
27
D
166 187Right-handed alpha
Helix 28
28
D
190 205Right-handed alpha
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There are 4 sheets in PDB entry 3LHK. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 103first strand
Strand 2
A
63 70parallel
Strand 3
A
126 131parallel
Strand 4
A
155 158parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 103first strand
Strand 2
B
64 70parallel
Strand 3
B
128 131parallel
Strand 4
B
155 158parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 103first strand
Strand 2
C
63 70parallel
Strand 3
C
126 131parallel
Strand 4
C
155 158parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 103first strand
Strand 2
D
63 70parallel
Strand 3
D
126 131parallel
Strand 4
D
155 158parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il