Analysis of interatomic Contacts of Structural Units in PDB entry:
3LHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LHX entry

There are 2 chains in PDB entry 3LHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 75PRO 381
B
 SER 79PRO 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3LHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 112Right-handed alpha
Helix 2
2
A
130 142Right-handed alpha
Helix 3
3
A
180 185Right-handed 310
Helix 4
4
A
190 199Right-handed alpha
Helix 5
5
A
208 213Right-handed alpha
Helix 6
6
A
215 232Right-handed alpha
Helix 7
7
A
243 247Right-handed 310
Helix 8
8
A
249 262Right-handed alpha
Helix 9
9
A
271 279Right-handed alpha
Helix 10
10
A
282 293Right-handed alpha
Helix 11
11
A
325 329Right-handed 310
Helix 12
12
A
334 348Right-handed alpha
Helix 13
13
A
352 368Right-handed alpha
Helix 14
14
A
376 380Right-handed 310
Helix 15
15
B
105 118Right-handed alpha
Helix 16
16
B
134 146Right-handed alpha
Helix 17
17
B
184 189Right-handed 310
Helix 18
18
B
194 203Right-handed alpha
Helix 19
19
B
212 217Right-handed alpha
Helix 20
20
B
219 236Right-handed alpha
Helix 21
21
B
247 251Right-handed 310
Helix 22
22
B
253 266Right-handed alpha
Helix 23
23
B
275 283Right-handed alpha
Helix 24
24
B
286 297Right-handed alpha
Helix 25
25
B
329 333Right-handed 310
Helix 26
26
B
338 352Right-handed alpha
Helix 27
27
B
356 372Right-handed alpha
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There are 6 sheets in PDB entry 3LHX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
119 124parallel
Strand 3
A
76 81parallel
Strand 4
A
203 207parallel
Strand 5
A
235 239parallel
Strand 6
A
266 270parallel
Strand 7
A
297 302parallel
Strand 8
A
305 311anti-parallel
Strand 9
A
317 319anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
160 164parallel
Strand 4
A
172 176anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
151 152parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
123 128parallel
Strand 3
B
80 85parallel
Strand 4
B
207 211parallel
Strand 5
B
239 243parallel
Strand 6
B
270 274parallel
Strand 7
B
301 306parallel
Strand 8
B
309 315anti-parallel
Strand 9
B
321 323anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
89 92anti-parallel
Strand 3
B
164 166parallel
Strand 4
B
178 180anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
155 157parallel
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