Analysis of interatomic Contacts of Structural Units in PDB entry:
3LJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LJB entry

There are 2 chains in PDB entry 3LJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 366ARG 633
B
 ASP 367THR 636
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3LJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
366 391Right-handed alpha
Helix 2
2
A
402 438Right-handed alpha
Helix 3
3
A
450 464Right-handed alpha
Helix 4
4
A
465 493Right-handed alpha
Helix 5
5
A
495 529Right-handed alpha
Helix 6
6
A
573 605Right-handed alpha
Helix 7
7
A
605 619Right-handed alpha
Helix 8
8
A
620 621Right-handed 310
Helix 9
9
A
622 624Right-handed 310
Helix 10
10
A
625 630Right-handed alpha
Helix 11
11
B
367 391Right-handed alpha
Helix 12
12
B
402 434Right-handed alpha
Helix 13
13
B
451 464Right-handed alpha
Helix 14
14
B
465 493Right-handed alpha
Helix 15
15
B
495 529Right-handed alpha
Helix 16
16
B
576 605Right-handed alpha
Helix 17
17
B
605 618Right-handed alpha
Helix 18
18
B
619 621Right-handed 310
Helix 19
19
B
622 624Right-handed 310
Helix 20
20
B
625 630Right-handed alpha
Helix 21
21
B
632 636Right-handed 310
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There are no sheets in PDB entry 3LJB
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il