Analysis of interatomic Contacts of Structural Units in PDB entry:
3LJT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LJT entry

There is 1 chain in PDB entry 3LJT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 263ILE 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3LJT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
276 284Right-handed alpha
Helix 2
2
A
286 303Right-handed alpha
Helix 3
3
A
304 308Right-handed 310
Helix 4
4
A
333 351Right-handed alpha
Helix 5
5
A
389 392Right-handed 310
Helix 6
6
A
403 416Right-handed alpha
Helix 7
7
A
423 431Right-handed alpha
Helix 8
8
A
442 446Right-handed 310
Helix 9
9
A
453 466Right-handed alpha
Helix 10
10
A
469 473Right-handed 310
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There is 1 sheet ( A) in PDB entry 3LJT.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 320first strand
Strand 2
A
267 275parallel
Strand 3
A
361 366parallel
Strand 4
A
394 398parallel
Strand 5
A
380 382anti-parallel
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