Analysis of interatomic Contacts of Structural Units in PDB entry:
3LKE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LKE entry

There are 3 chains in PDB entry 3LKE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3LEU 254
B
 SER 4LEU 254
C
 LEU 3LEU 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3LKE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 25Right-handed 310
Helix 2
2
A
29 46Right-handed alpha
Helix 3
3
A
67 77Right-handed alpha
Helix 4
4
A
80 99Right-handed alpha
Helix 5
5
A
114 119Right-handed alpha
Helix 6
6
A
120 123Right-handed 310
Helix 7
7
A
137 142Right-handed alpha
Helix 8
8
A
148 158Right-handed alpha
Helix 9
9
A
158 169Right-handed alpha
Helix 10
10
A
174 180Right-handed alpha
Helix 11
11
A
189 206Right-handed alpha
Helix 12
12
A
208 221Right-handed alpha
Helix 13
13
A
222 242Right-handed alpha
Helix 14
14
A
244 254Right-handed alpha
Helix 15
15
B
21 25Right-handed 310
Helix 16
16
B
29 45Right-handed alpha
Helix 17
17
B
67 77Right-handed alpha
Helix 18
18
B
80 99Right-handed alpha
Helix 19
19
B
114 119Right-handed alpha
Helix 20
20
B
120 123Right-handed 310
Helix 21
21
B
137 142Right-handed alpha
Helix 22
22
B
148 158Right-handed alpha
Helix 23
23
B
158 169Right-handed alpha
Helix 24
24
B
174 180Right-handed alpha
Helix 25
25
B
189 206Right-handed alpha
Helix 26
26
B
208 221Right-handed alpha
Helix 27
27
B
222 242Right-handed alpha
Helix 28
28
B
244 254Right-handed alpha
Helix 29
29
C
21 25Right-handed 310
Helix 30
30
C
29 45Right-handed alpha
Helix 31
31
C
67 77Right-handed alpha
Helix 32
32
C
80 99Right-handed alpha
Helix 33
33
C
114 119Right-handed alpha
Helix 34
34
C
120 123Right-handed 310
Helix 35
35
C
137 142Right-handed alpha
Helix 36
36
C
148 158Right-handed alpha
Helix 37
37
C
158 169Right-handed alpha
Helix 38
38
C
174 181Right-handed alpha
Helix 39
39
C
189 206Right-handed alpha
Helix 40
40
C
208 221Right-handed alpha
Helix 41
41
C
222 243Right-handed alpha
Helix 42
42
C
244 254Right-handed alpha
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There are 6 sheets in PDB entry 3LKE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
14 19anti-parallel
Strand 3
A
51 56parallel
Strand 4
A
103 108parallel
Strand 5
A
125 129parallel
Strand 6
A
185 187parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
111 113parallel
Strand 3
A
133 135parallel
Strand 4
A
172 173anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
14 19anti-parallel
Strand 3
B
51 56parallel
Strand 4
B
103 108parallel
Strand 5
B
125 129parallel
Strand 6
B
185 187parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
111 113parallel
Strand 3
B
133 135parallel
Strand 4
B
172 173anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 11first strand
Strand 2
C
14 19anti-parallel
Strand 3
C
51 56parallel
Strand 4
C
103 108parallel
Strand 5
C
125 129parallel
Strand 6
C
185 187parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
111 113parallel
Strand 3
C
133 135parallel
Strand 4
C
172 173anti-parallel
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