Analysis of interatomic Contacts of Structural Units in PDB entry:
3LL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LL7 entry

There is 1 chain in PDB entry 3LL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLU 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3LL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 18Right-handed alpha
Helix 2
2
A
22 29Right-handed alpha
Helix 3
3
A
34 36Right-handed 310
Helix 4
4
A
37 55Right-handed alpha
Helix 5
5
A
55 60Right-handed alpha
Helix 6
6
A
68 75Right-handed alpha
Helix 7
7
A
77 84Right-handed alpha
Helix 8
8
A
85 88Right-handed 310
Helix 9
9
A
102 110Right-handed alpha
Helix 10
10
A
121 136Right-handed alpha
Helix 11
11
A
148 151Right-handed 310
Helix 12
12
A
152 160Right-handed alpha
Helix 13
13
A
180 182Right-handed 310
Helix 14
14
A
187 196Right-handed alpha
Helix 15
15
A
197 199Right-handed 310
Helix 16
16
A
211 219Right-handed alpha
Helix 17
17
A
249 253Right-handed 310
Helix 18
18
A
272 279Right-handed alpha
Helix 19
19
A
295 302Right-handed alpha
Helix 20
20
A
303 312Right-handed alpha
Helix 21
21
A
346 356Right-handed 310
Helix 22
22
A
370 379Right-handed alpha
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There are 3 sheets in PDB entry 3LL7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 146first strand
Strand 2
A
114 119parallel
Strand 3
A
93 96parallel
Strand 4
A
163 166parallel
Strand 5
A
201 206parallel
Strand 6
A
233 241anti-parallel
Strand 7
A
222 230anti-parallel
Strand 8
A
255 260parallel
Strand 9
A
269 271anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
184 185anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 317first strand
Strand 2
A
320 325anti-parallel
Strand 3
A
290 294anti-parallel
Strand 4
A
334 344anti-parallel
Strand 5
A
398 405anti-parallel
Strand 6
A
386 392anti-parallel
Strand 7
A
361 365parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il