Analysis of interatomic Contacts of Structural Units in PDB entry:
3LLS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LLS entry

There are 2 chains in PDB entry 3LLS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 29ALA 454
B
 PRO 31ALA 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3LLS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 65Right-handed alpha
Helix 2
2
A
95 98Right-handed 310
Helix 3
3
A
99 107Right-handed alpha
Helix 4
4
A
109 111Right-handed 310
Helix 5
5
A
126 129Right-handed 310
Helix 6
6
A
131 150Right-handed alpha
Helix 7
7
A
171 173Right-handed 310
Helix 8
8
A
174 182Right-handed alpha
Helix 9
9
A
183 187Right-handed 310
Helix 10
10
A
224 236Right-handed alpha
Helix 11
11
A
245 248Right-handed 310
Helix 12
12
A
249 260Right-handed alpha
Helix 13
13
A
272 286Right-handed alpha
Helix 14
14
A
303 307Right-handed 310
Helix 15
15
A
308 320Right-handed alpha
Helix 16
16
A
320 333Right-handed alpha
Helix 17
17
A
347 353Right-handed alpha
Helix 18
18
A
357 381Right-handed alpha
Helix 19
19
A
420 433Right-handed alpha
Helix 20
20
A
434 437Right-handed 310
Helix 21
21
B
56 65Right-handed alpha
Helix 22
22
B
95 98Right-handed 310
Helix 23
23
B
99 111Right-handed alpha
Helix 24
24
B
126 129Right-handed 310
Helix 25
25
B
131 150Right-handed alpha
Helix 26
26
B
171 173Right-handed 310
Helix 27
27
B
174 182Right-handed alpha
Helix 28
28
B
183 187Right-handed 310
Helix 29
29
B
223 236Right-handed alpha
Helix 30
30
B
245 247Right-handed 310
Helix 31
31
B
248 260Right-handed alpha
Helix 32
32
B
272 285Right-handed alpha
Helix 33
33
B
303 307Right-handed 310
Helix 34
34
B
308 320Right-handed alpha
Helix 35
35
B
320 333Right-handed alpha
Helix 36
36
B
347 353Right-handed alpha
Helix 37
37
B
357 380Right-handed alpha
Helix 38
38
B
420 433Right-handed alpha
Helix 39
39
B
434 437Right-handed 310
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There are 4 sheets in PDB entry 3LLS. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
47 52parallel
Strand 3
A
83 89parallel
Strand 4
A
113 124parallel
Strand 5
A
157 163parallel
Strand 6
A
192 196parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 265first strand
Strand 2
A
239 244parallel
Strand 3
A
215 218parallel
Strand 4
A
289 294parallel
Strand 5
A
336 345parallel
Strand 6
A
384 390parallel
Strand 7
B
443 446parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
B
384 390parallel
Strand 3
B
336 345parallel
Strand 4
B
289 294parallel
Strand 5
B
215 219parallel
Strand 6
B
239 244parallel
Strand 7
B
262 265parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 71first strand
Strand 2
B
47 52parallel
Strand 3
B
83 89parallel
Strand 4
B
113 124parallel
Strand 5
B
157 163parallel
Strand 6
B
192 196parallel
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