Analysis of interatomic Contacts of Structural Units in PDB entry:
3LLT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LLT entry

There is 1 chain in PDB entry 3LLT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 535GLU 875
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3LLT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
535 539Right-handed 310
Helix 2
2
A
586 603Right-handed alpha
Helix 3
3
A
609 613Right-handed 310
Helix 4
4
A
636 644Right-handed alpha
Helix 5
5
A
650 671Right-handed alpha
Helix 6
6
A
737 741Right-handed 310
Helix 7
7
A
742 747Right-handed alpha
Helix 8
8
A
754 770Right-handed alpha
Helix 9
9
A
778 790Right-handed alpha
Helix 10
10
A
794 802Right-handed alpha
Helix 11
11
A
803 808Right-handed 310
Helix 12
12
A
825 834Right-handed alpha
Helix 13
13
A
837 842Right-handed alpha
Helix 14
14
A
844 855Right-handed alpha
Helix 15
15
A
858 862Right-handed 310
Helix 16
16
A
864 869Right-handed alpha
Helix 17
17
A
870 875Right-handed 310
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There are 5 sheets in PDB entry 3LLT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
552 560anti-parallel
Strand 3
A
564 571anti-parallel
Strand 4
A
577 583anti-parallel
Strand 5
A
625 630anti-parallel
Strand 6
A
616 622anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 674first strand
Strand 2
A
725 726anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
683 685first strand
Strand 2
A
716 718anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 698first strand
Strand 2
A
705 711anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
810 811first strand
Strand 2
A
816 817anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il