Analysis of interatomic Contacts of Structural Units in PDB entry:
3LLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LLW entry

There are 4 chains in PDB entry 3LLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 300
B
 SER 0GLY 301
C
 SER 0LYS 300
D
 SER 2LYS 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 3LLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 22Right-handed alpha
Helix 2
2
A
33 44Right-handed alpha
Helix 3
3
A
48 62Right-handed alpha
Helix 4
4
A
63 70Right-handed alpha
Helix 5
5
A
70 93Right-handed alpha
Helix 6
6
A
108 113Right-handed alpha
Helix 7
7
A
114 136Right-handed alpha
Helix 8
8
A
139 155Right-handed alpha
Helix 9
9
A
158 169Right-handed alpha
Helix 10
10
A
175 187Right-handed alpha
Helix 11
11
A
187 203Right-handed alpha
Helix 12
12
A
206 235Right-handed alpha
Helix 13
13
A
252 258Right-handed alpha
Helix 14
14
A
258 278Right-handed alpha
Helix 15
15
A
284 300Right-handed alpha
Helix 16
16
B
3 22Right-handed alpha
Helix 17
17
B
33 44Right-handed alpha
Helix 18
18
B
48 62Right-handed alpha
Helix 19
19
B
63 70Right-handed alpha
Helix 20
20
B
70 94Right-handed alpha
Helix 21
21
B
108 113Right-handed alpha
Helix 22
22
B
114 135Right-handed alpha
Helix 23
23
B
139 155Right-handed alpha
Helix 24
24
B
158 169Right-handed alpha
Helix 25
25
B
175 187Right-handed alpha
Helix 26
26
B
187 202Right-handed alpha
Helix 27
27
B
206 235Right-handed alpha
Helix 28
28
B
252 258Right-handed alpha
Helix 29
29
B
258 279Right-handed alpha
Helix 30
30
B
284 299Right-handed alpha
Helix 31
31
C
3 23Right-handed alpha
Helix 32
32
C
33 44Right-handed alpha
Helix 33
33
C
48 62Right-handed alpha
Helix 34
34
C
63 70Right-handed alpha
Helix 35
35
C
70 94Right-handed alpha
Helix 36
36
C
108 113Right-handed alpha
Helix 37
37
C
114 136Right-handed alpha
Helix 38
38
C
139 155Right-handed alpha
Helix 39
39
C
158 169Right-handed alpha
Helix 40
40
C
175 187Right-handed alpha
Helix 41
41
C
187 203Right-handed alpha
Helix 42
42
C
206 231Right-handed alpha
Helix 43
43
C
232 234Right-handed 310
Helix 44
44
C
252 258Right-handed alpha
Helix 45
45
C
258 278Right-handed alpha
Helix 46
46
C
284 300Right-handed alpha
Helix 47
47
D
3 22Right-handed alpha
Helix 48
48
D
33 44Right-handed alpha
Helix 49
49
D
48 62Right-handed alpha
Helix 50
50
D
63 69Right-handed alpha
Helix 51
51
D
70 93Right-handed alpha
Helix 52
52
D
108 113Right-handed alpha
Helix 53
53
D
114 135Right-handed alpha
Helix 54
54
D
139 155Right-handed alpha
Helix 55
55
D
158 169Right-handed alpha
Helix 56
56
D
175 187Right-handed alpha
Helix 57
57
D
187 203Right-handed alpha
Helix 58
58
D
206 235Right-handed alpha
Helix 59
59
D
252 258Right-handed alpha
Helix 60
60
D
258 278Right-handed alpha
Helix 61
61
D
279 281Right-handed 310
Helix 62
62
D
284 300Right-handed alpha
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There are 4 sheets in PDB entry 3LLW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
106 107anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
106 107anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
106 107anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 103first strand
Strand 2
D
106 107anti-parallel
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