Analysis of interatomic Contacts of Structural Units in PDB entry:
3LN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LN6 entry

There is 1 chain in PDB entry 3LN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4LEU 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3LN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
73 92Right-handed alpha
Helix 3
3
A
119 134Right-handed alpha
Helix 4
4
A
135 140Right-handed 310
Helix 5
5
A
150 162Right-handed alpha
Helix 6
6
A
165 192Right-handed alpha
Helix 7
7
A
233 244Right-handed alpha
Helix 8
8
A
252 256Right-handed 310
Helix 9
9
A
295 312Right-handed alpha
Helix 10
10
A
317 335Right-handed alpha
Helix 11
11
A
346 362Right-handed alpha
Helix 12
12
A
364 380Right-handed alpha
Helix 13
13
A
381 383Right-handed 310
Helix 14
14
A
384 393Right-handed alpha
Helix 15
15
A
398 414Right-handed alpha
Helix 16
16
A
420 424Right-handed 310
Helix 17
17
A
427 441Right-handed alpha
Helix 18
18
A
476 482Right-handed alpha
Helix 19
19
A
485 495Right-handed alpha
Helix 20
20
A
510 518Right-handed alpha
Helix 21
21
A
544 559Right-handed alpha
Helix 22
22
A
600 609Right-handed alpha
Helix 23
23
A
628 638Right-handed alpha
Helix 24
24
A
674 688Right-handed alpha
Helix 25
25
A
724 729Right-handed alpha
Helix 26
26
A
738 747Right-handed alpha
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There are 7 sheets in PDB entry 3LN6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
19 31anti-parallel
Strand 3
A
96 98anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
63 67anti-parallel
Strand 3
A
19 31anti-parallel
Strand 4
A
143 149anti-parallel
Strand 5
A
278 281anti-parallel
Strand 6
A
260 263anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
A
453 458anti-parallel
Strand 3
A
461 466anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 506first strand
Strand 2
A
561 566anti-parallel
Strand 3
A
523 527anti-parallel
Strand 4
A
537 539anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 668first strand
Strand 2
A
581 589anti-parallel
Strand 3
A
571 578anti-parallel
Strand 4
A
694 699anti-parallel
Strand 5
A
714 719anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
651 653anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 615first strand
Strand 2
A
622 623parallel
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