Analysis of interatomic Contacts of Structural Units in PDB entry:
3LN7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LN7 entry

There are 2 chains in PDB entry 3LN7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LEU 756
B
 LYS 2LEU 756
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3LN7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 11Right-handed 310
Helix 2
2
A
12 18Right-handed alpha
Helix 3
3
A
72 91Right-handed alpha
Helix 4
4
A
119 134Right-handed alpha
Helix 5
5
A
135 140Right-handed alpha
Helix 6
6
A
150 161Right-handed alpha
Helix 7
7
A
166 193Right-handed alpha
Helix 8
8
A
238 252Right-handed alpha
Helix 9
9
A
272 274Right-handed 310
Helix 10
10
A
275 280Right-handed alpha
Helix 11
11
A
300 317Right-handed alpha
Helix 12
12
A
322 339Right-handed alpha
Helix 13
13
A
347 365Right-handed alpha
Helix 14
14
A
368 384Right-handed alpha
Helix 15
15
A
385 387Right-handed 310
Helix 16
16
A
388 400Right-handed alpha
Helix 17
17
A
402 420Right-handed alpha
Helix 18
18
A
432 446Right-handed alpha
Helix 19
19
A
481 490Right-handed alpha
Helix 20
20
A
490 501Right-handed alpha
Helix 21
21
A
512 519Right-handed alpha
Helix 22
22
A
520 523Right-handed 310
Helix 23
23
A
550 565Right-handed alpha
Helix 24
24
A
602 604Right-handed 310
Helix 25
25
A
606 616Right-handed alpha
Helix 26
26
A
634 645Right-handed alpha
Helix 27
27
A
665 669Right-handed 310
Helix 28
28
A
680 695Right-handed alpha
Helix 29
29
A
729 735Right-handed alpha
Helix 30
30
A
744 753Right-handed alpha
Helix 31
31
B
6 11Right-handed alpha
Helix 32
32
B
12 18Right-handed alpha
Helix 33
33
B
72 91Right-handed alpha
Helix 34
34
B
126 134Right-handed alpha
Helix 35
35
B
135 140Right-handed 310
Helix 36
36
B
150 161Right-handed alpha
Helix 37
37
B
166 193Right-handed alpha
Helix 38
38
B
238 251Right-handed alpha
Helix 39
39
B
273 280Right-handed alpha
Helix 40
40
B
300 317Right-handed alpha
Helix 41
41
B
322 339Right-handed alpha
Helix 42
42
B
347 366Right-handed alpha
Helix 43
43
B
368 384Right-handed alpha
Helix 44
44
B
385 387Right-handed 310
Helix 45
45
B
388 401Right-handed alpha
Helix 46
46
B
402 419Right-handed alpha
Helix 47
47
B
420 422Right-handed 310
Helix 48
48
B
425 429Right-handed 310
Helix 49
49
B
432 446Right-handed alpha
Helix 50
50
B
481 490Right-handed alpha
Helix 51
51
B
490 501Right-handed alpha
Helix 52
52
B
512 519Right-handed alpha
Helix 53
53
B
520 523Right-handed 310
Helix 54
54
B
550 565Right-handed alpha
Helix 55
55
B
606 615Right-handed alpha
Helix 56
56
B
634 644Right-handed alpha
Helix 57
57
B
680 695Right-handed alpha
Helix 58
58
B
730 735Right-handed alpha
Helix 59
59
B
743 753Right-handed alpha
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There are 13 sheets in PDB entry 3LN7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
62 70anti-parallel
Strand 3
A
19 28anti-parallel
Strand 4
A
144 149anti-parallel
Strand 5
A
283 286anti-parallel
Strand 6
A
265 268anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
95 96anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 453first strand
Strand 2
A
458 463anti-parallel
Strand 3
A
466 471anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 510first strand
Strand 2
A
568 572anti-parallel
Strand 3
A
528 532anti-parallel
Strand 4
A
542 543anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 674first strand
Strand 2
A
587 594anti-parallel
Strand 3
A
577 584anti-parallel
Strand 4
A
698 705anti-parallel
Strand 5
A
720 725anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
598 600first strand
Strand 2
A
657 659anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
620 621first strand
Strand 2
A
628 629parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 56first strand
Strand 2
B
62 70anti-parallel
Strand 3
B
19 31anti-parallel
Strand 4
B
95 97anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 56first strand
Strand 2
B
62 70anti-parallel
Strand 3
B
19 31anti-parallel
Strand 4
B
142 149anti-parallel
Strand 5
B
284 290anti-parallel
Strand 6
B
265 266anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 453first strand
Strand 2
B
458 463anti-parallel
Strand 3
B
466 471anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
507 510first strand
Strand 2
B
568 572anti-parallel
Strand 3
B
528 532anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
671 674first strand
Strand 2
B
587 595anti-parallel
Strand 3
B
577 584anti-parallel
Strand 4
B
700 705anti-parallel
Strand 5
B
720 725anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
598 600first strand
Strand 2
B
657 659anti-parallel
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