Analysis of interatomic Contacts of Structural Units in PDB entry:
3LNZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LNZ entry

There are 16 chains in PDB entry 3LNZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 25VAL 109
B
 THR 1SER 11
C
 LEU 27VAL 108
D
 THR 1SER 11
E
 LEU 27VAL 108
F
 THR 1SER 11
G
 THR 26VAL 109
H
 THR 1PRO 12
I
 THR 26VAL 108
J
 THR 1SER 11
K
 THR 26VAL 108
L
 THR 1PRO 12
M
 LEU 27VAL 109
N
 THR 1SER 11
O
 THR 26VAL 108
P
 THR 1SER 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3LNZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 40Right-handed alpha
Helix 2
2
A
49 64Right-handed alpha
Helix 3
3
A
80 87Right-handed alpha
Helix 4
4
A
95 106Right-handed alpha
Helix 5
33
B
2 9Right-handed alpha
Helix 6
5
C
31 40Right-handed alpha
Helix 7
6
C
49 64Right-handed alpha
Helix 8
7
C
80 87Right-handed alpha
Helix 9
8
C
95 105Right-handed alpha
Helix 10
34
D
2 9Right-handed alpha
Helix 11
9
E
31 41Right-handed alpha
Helix 12
10
E
49 64Right-handed alpha
Helix 13
11
E
80 87Right-handed alpha
Helix 14
12
E
95 106Right-handed alpha
Helix 15
35
F
2 10Right-handed alpha
Helix 16
13
G
31 40Right-handed alpha
Helix 17
14
G
49 64Right-handed alpha
Helix 18
15
G
80 87Right-handed alpha
Helix 19
16
G
95 106Right-handed alpha
Helix 20
36
H
2 11Right-handed alpha
Helix 21
17
I
31 40Right-handed alpha
Helix 22
18
I
49 64Right-handed alpha
Helix 23
19
I
80 87Right-handed alpha
Helix 24
20
I
95 105Right-handed alpha
Helix 25
37
J
2 9Right-handed alpha
Helix 26
21
K
31 40Right-handed alpha
Helix 27
22
K
49 64Right-handed alpha
Helix 28
23
K
80 87Right-handed alpha
Helix 29
24
K
95 106Right-handed alpha
Helix 30
38
L
2 11Right-handed alpha
Helix 31
25
M
31 41Right-handed alpha
Helix 32
26
M
49 64Right-handed alpha
Helix 33
27
M
80 87Right-handed alpha
Helix 34
28
M
95 105Right-handed alpha
Helix 35
39
N
2 9Right-handed alpha
Helix 36
29
O
31 41Right-handed alpha
Helix 37
30
O
49 64Right-handed alpha
Helix 38
31
O
80 87Right-handed alpha
Helix 39
32
O
95 105Right-handed alpha
Helix 40
40
P
2 9Right-handed alpha
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There are 12 sheets in PDB entry 3LNZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
107 108anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
90 92anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 76first strand
Strand 2
C
90 92anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
74 76first strand
Strand 2
E
90 92anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
29 30first strand
Strand 2
G
107 108anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
74 76first strand
Strand 2
G
90 92anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
74 76first strand
Strand 2
I
90 92anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
29 30first strand
Strand 2
K
107 108anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
74 76first strand
Strand 2
K
90 92anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
29 30first strand
Strand 2
M
107 108anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
74 76first strand
Strand 2
M
90 92anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
74 76first strand
Strand 2
O
90 92anti-parallel
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