Analysis of interatomic Contacts of Structural Units in PDB entry:
3LOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LOF entry

There are 6 chains in PDB entry 3LOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 530GLY 613
B
 ASN 530GLY 615
C
 ASN 530GLY 615
D
 ASN 530GLY 613
E
 ASN 530GLY 616
F
 ASN 530ALA 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 3LOF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
530 554Right-handed alpha
Helix 2
2
A
555 559Right-handed 310
Helix 3
3
A
563 584Right-handed alpha
Helix 4
4
A
588 613Right-handed alpha
Helix 5
5
B
530 554Right-handed alpha
Helix 6
6
B
563 584Right-handed alpha
Helix 7
7
B
588 609Right-handed alpha
Helix 8
8
C
530 553Right-handed alpha
Helix 9
9
C
563 584Right-handed alpha
Helix 10
10
C
588 609Right-handed alpha
Helix 11
11
D
530 554Right-handed alpha
Helix 12
12
D
563 584Right-handed alpha
Helix 13
13
D
588 612Right-handed alpha
Helix 14
14
E
530 554Right-handed alpha
Helix 15
15
E
563 584Right-handed alpha
Helix 16
16
E
588 609Right-handed alpha
Helix 17
17
F
530 554Right-handed alpha
Helix 18
18
F
563 584Right-handed alpha
Helix 19
19
F
588 610Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3LOF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il