Analysis of interatomic Contacts of Structural Units in PDB entry:
3LOM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LOM entry

There are 2 chains in PDB entry 3LOM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 8GLU 310
B
 ASN 8LEU 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3LOM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 33Right-handed alpha
Helix 2
2
A
39 51Right-handed alpha
Helix 3
3
A
56 69Right-handed alpha
Helix 4
4
A
72 96Right-handed alpha
Helix 5
5
A
110 115Right-handed alpha
Helix 6
6
A
116 140Right-handed alpha
Helix 7
7
A
144 160Right-handed alpha
Helix 8
8
A
163 174Right-handed alpha
Helix 9
9
A
181 193Right-handed alpha
Helix 10
10
A
193 206Right-handed alpha
Helix 11
11
A
212 241Right-handed alpha
Helix 12
12
A
260 265Right-handed alpha
Helix 13
13
A
266 284Right-handed alpha
Helix 14
14
A
288 291Right-handed 310
Helix 15
15
A
292 308Right-handed alpha
Helix 16
16
B
8 35Right-handed alpha
Helix 17
17
B
39 51Right-handed alpha
Helix 18
18
B
56 69Right-handed alpha
Helix 19
19
B
72 96Right-handed alpha
Helix 20
20
B
110 115Right-handed alpha
Helix 21
21
B
116 139Right-handed alpha
Helix 22
22
B
144 160Right-handed alpha
Helix 23
23
B
163 175Right-handed alpha
Helix 24
24
B
181 193Right-handed alpha
Helix 25
25
B
193 206Right-handed alpha
Helix 26
26
B
212 241Right-handed alpha
Helix 27
27
B
260 265Right-handed alpha
Helix 28
28
B
266 285Right-handed alpha
Helix 29
29
B
288 291Right-handed 310
Helix 30
30
B
292 304Right-handed alpha
Helix 31
31
B
305 307Right-handed 310
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There is 1 sheet ( A) in PDB entry 3LOM.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
108 109anti-parallel
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