Analysis of interatomic Contacts of Structural Units in PDB entry:
3LOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LOV entry

There is 1 chain in PDB entry 3LOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLN 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3LOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 26Right-handed alpha
Helix 2
2
A
66 75Right-handed alpha
Helix 3
3
A
77 79Right-handed 310
Helix 4
4
A
111 116Right-handed alpha
Helix 5
5
A
122 135Right-handed alpha
Helix 6
6
A
148 158Right-handed alpha
Helix 7
7
A
158 165Right-handed alpha
Helix 8
8
A
165 172Right-handed alpha
Helix 9
9
A
173 175Right-handed 310
Helix 10
10
A
187 198Right-handed alpha
Helix 11
11
A
199 207Right-handed alpha
Helix 12
12
A
233 245Right-handed alpha
Helix 13
13
A
285 293Right-handed alpha
Helix 14
14
A
298 303Right-handed alpha
Helix 15
15
A
345 349Right-handed alpha
Helix 16
16
A
369 374Right-handed 310
Helix 17
17
A
375 392Right-handed alpha
Helix 18
18
A
415 431Right-handed alpha
Helix 19
19
A
445 463Right-handed alpha
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There are 6 sheets in PDB entry 3LOV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
30 34parallel
Strand 3
A
5 9parallel
Strand 4
A
279 282parallel
Strand 5
A
434 436parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
54 55anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
227 230anti-parallel
Strand 3
A
81 83anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
328 331parallel
Strand 4
A
339 344anti-parallel
Strand 5
A
356 363anti-parallel
Strand 6
A
306 317anti-parallel
Strand 7
A
399 410anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
108 109anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 262first strand
Strand 2
A
265 269anti-parallel
Strand 3
A
275 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il