Analysis of interatomic Contacts of Structural Units in PDB entry:
3LQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LQI entry

There are 9 chains in PDB entry 3LQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1565GLU 1778
B
 SER 1565PRO 1779
C
 SER 1565SER 1784
R
 ALA 1THR 3
R
 GLN 5THR 6
S
 ALA 1THR 3
S
 GLN 5ALA 7
T
 ALA 1THR 3
T
 GLN 5LYS 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3LQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1598 1601Right-handed 310
Helix 2
2
A
1603 1612Right-handed alpha
Helix 3
3
A
1630 1653Right-handed alpha
Helix 4
4
A
1654 1662Right-handed alpha
Helix 5
5
A
1707 1717Right-handed alpha
Helix 6
6
A
1722 1740Right-handed alpha
Helix 7
7
A
1744 1766Right-handed alpha
Helix 8
8
A
1770 1774Right-handed 310
Helix 9
9
B
1598 1601Right-handed 310
Helix 10
10
B
1603 1611Right-handed alpha
Helix 11
11
B
1630 1654Right-handed alpha
Helix 12
12
B
1654 1662Right-handed alpha
Helix 13
13
B
1707 1717Right-handed alpha
Helix 14
14
B
1722 1740Right-handed alpha
Helix 15
15
B
1744 1766Right-handed alpha
Helix 16
16
C
1598 1601Right-handed 310
Helix 17
17
C
1603 1611Right-handed alpha
Helix 18
18
C
1630 1654Right-handed alpha
Helix 19
19
C
1655 1661Right-handed 310
Helix 20
20
C
1707 1717Right-handed alpha
Helix 21
21
C
1722 1741Right-handed alpha
Helix 22
22
C
1744 1766Right-handed alpha
Helix 23
23
C
1777 1781Right-handed 310
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There are 6 sheets in PDB entry 3LQI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1566 1568first strand
Strand 2
A
1575 1577anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1585 1587first strand
Strand 2
A
1594 1596anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1566 1568first strand
Strand 2
B
1575 1577anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1585 1587first strand
Strand 2
B
1594 1596anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1566 1568first strand
Strand 2
C
1575 1577anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1594 1596first strand
Strand 2
C
1585 1587anti-parallel
Strand 3
T
2 3anti-parallel
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