Analysis of interatomic Contacts of Structural Units in PDB entry:
3LRX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LRX entry

There are 6 chains in PDB entry 3LRX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 88LEU 219
B
 GLY 88LEU 219
C
 PRO 89LEU 219
D
 GLY 88ASP 218
E
 PRO 89PRO 221
F
 GLY 88LEU 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3LRX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
109 125Right-handed alpha
Helix 2
2
A
135 139Right-handed 310
Helix 3
3
A
141 149Right-handed alpha
Helix 4
4
A
164 187Right-handed alpha
Helix 5
5
A
197 209Right-handed alpha
Helix 6
6
A
210 212Right-handed 310
Helix 7
7
B
109 125Right-handed alpha
Helix 8
8
B
137 139Right-handed 310
Helix 9
9
B
141 149Right-handed alpha
Helix 10
10
B
164 185Right-handed alpha
Helix 11
11
B
197 209Right-handed alpha
Helix 12
12
B
210 212Right-handed 310
Helix 13
13
C
109 125Right-handed alpha
Helix 14
14
C
135 139Right-handed 310
Helix 15
15
C
141 149Right-handed alpha
Helix 16
16
C
164 184Right-handed alpha
Helix 17
17
C
197 211Right-handed alpha
Helix 18
18
D
109 125Right-handed alpha
Helix 19
19
D
137 139Right-handed 310
Helix 20
20
D
141 149Right-handed alpha
Helix 21
21
D
168 187Right-handed alpha
Helix 22
22
D
197 211Right-handed alpha
Helix 23
23
E
109 125Right-handed alpha
Helix 24
24
E
135 139Right-handed 310
Helix 25
25
E
141 149Right-handed alpha
Helix 26
26
E
164 184Right-handed alpha
Helix 27
27
E
197 210Right-handed alpha
Helix 28
28
F
109 125Right-handed alpha
Helix 29
29
F
135 139Right-handed 310
Helix 30
30
F
141 149Right-handed alpha
Helix 31
31
F
164 187Right-handed alpha
Helix 32
32
F
197 210Right-handed alpha
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There are 6 sheets in PDB entry 3LRX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
127 133parallel
Strand 3
A
101 107parallel
Strand 4
A
191 195parallel
Strand 5
A
215 217parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 157first strand
Strand 2
B
127 135parallel
Strand 3
B
101 107parallel
Strand 4
B
191 195parallel
Strand 5
B
215 217parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 154first strand
Strand 2
C
127 133parallel
Strand 3
C
101 107parallel
Strand 4
C
191 195parallel
Strand 5
C
215 216parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
151 157first strand
Strand 2
D
127 135parallel
Strand 3
D
101 107parallel
Strand 4
D
191 195parallel
Strand 5
D
215 217parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
151 154first strand
Strand 2
E
127 133parallel
Strand 3
E
101 107parallel
Strand 4
E
191 195parallel
Strand 5
E
215 217parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
151 154first strand
Strand 2
F
127 133parallel
Strand 3
F
101 107parallel
Strand 4
F
191 195parallel
Strand 5
F
215 217parallel
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