Analysis of interatomic Contacts of Structural Units in PDB entry:
3LSB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LSB entry

There are 2 chains in PDB entry 3LSB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 453
B
 MET 1PRO 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3LSB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 72Right-handed 310
Helix 2
2
A
74 78Right-handed 310
Helix 3
3
A
81 99Right-handed alpha
Helix 4
4
A
103 121Right-handed alpha
Helix 5
5
A
140 153Right-handed alpha
Helix 6
6
A
166 170Right-handed 310
Helix 7
7
A
180 196Right-handed alpha
Helix 8
8
A
217 232Right-handed alpha
Helix 9
9
A
243 253Right-handed alpha
Helix 10
10
A
255 263Right-handed alpha
Helix 11
11
A
279 281Right-handed 310
Helix 12
12
A
282 290Right-handed alpha
Helix 13
13
A
296 303Right-handed alpha
Helix 14
14
A
309 316Right-handed alpha
Helix 15
15
A
334 346Right-handed alpha
Helix 16
16
A
347 350Right-handed 310
Helix 17
17
A
359 367Right-handed alpha
Helix 18
18
A
368 375Right-handed alpha
Helix 19
19
A
398 402Right-handed 310
Helix 20
20
A
406 414Right-handed alpha
Helix 21
21
A
440 450Right-handed alpha
Helix 22
22
B
65 72Right-handed 310
Helix 23
23
B
74 78Right-handed 310
Helix 24
24
B
81 99Right-handed alpha
Helix 25
25
B
103 121Right-handed alpha
Helix 26
26
B
140 153Right-handed alpha
Helix 27
27
B
166 170Right-handed 310
Helix 28
28
B
180 196Right-handed alpha
Helix 29
29
B
217 232Right-handed alpha
Helix 30
30
B
243 253Right-handed alpha
Helix 31
31
B
255 263Right-handed alpha
Helix 32
32
B
279 281Right-handed 310
Helix 33
33
B
282 290Right-handed alpha
Helix 34
34
B
296 303Right-handed alpha
Helix 35
35
B
309 316Right-handed alpha
Helix 36
36
B
326 330Right-handed 310
Helix 37
37
B
334 346Right-handed alpha
Helix 38
38
B
347 350Right-handed 310
Helix 39
39
B
353 357Right-handed 310
Helix 40
40
B
359 367Right-handed alpha
Helix 41
41
B
368 375Right-handed alpha
Helix 42
42
B
398 402Right-handed 310
Helix 43
43
B
406 414Right-handed alpha
Helix 44
44
B
440 452Right-handed alpha
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There are 6 sheets in PDB entry 3LSB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
19 28anti-parallel
Strand 3
A
2 11anti-parallel
Strand 4
A
46 49parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
19 28anti-parallel
Strand 3
A
2 11anti-parallel
Strand 4
A
53 57parallel
Strand 5
A
391 395anti-parallel
Strand 6
A
422 425anti-parallel
Strand 7
A
428 432anti-parallel
Strand 8
A
435 436anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
123 130parallel
Strand 3
A
155 160parallel
Strand 4
A
204 208parallel
Strand 5
A
234 239parallel
Strand 6
A
270 274parallel
Strand 7
A
292 295parallel
Strand 8
A
319 322parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
19 28anti-parallel
Strand 3
B
2 11anti-parallel
Strand 4
B
46 49parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
19 28anti-parallel
Strand 3
B
2 11anti-parallel
Strand 4
B
53 57parallel
Strand 5
B
391 395anti-parallel
Strand 6
B
422 425anti-parallel
Strand 7
B
428 432anti-parallel
Strand 8
B
435 436anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
123 128parallel
Strand 3
B
155 160parallel
Strand 4
B
204 208parallel
Strand 5
B
234 239parallel
Strand 6
B
270 274parallel
Strand 7
B
292 295parallel
Strand 8
B
319 322parallel
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