Analysis of interatomic Contacts of Structural Units in PDB entry:
3LTN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LTN entry

There are 4 chains in PDB entry 3LTN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3GLU 483
B
 ASN 3GLU 483
C
 LYS 415THR 640
D
 LYS 415LEU 603
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 3LTN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
38 51Right-handed alpha
Helix 3
3
A
62 73Right-handed alpha
Helix 4
4
A
77 89Right-handed alpha
Helix 5
5
A
125 132Right-handed alpha
Helix 6
6
A
160 166Right-handed alpha
Helix 7
7
A
182 196Right-handed alpha
Helix 8
8
A
200 208Right-handed alpha
Helix 9
9
A
221 232Right-handed alpha
Helix 10
10
A
264 278Right-handed alpha
Helix 11
11
A
307 319Right-handed alpha
Helix 12
12
A
341 384Right-handed alpha
Helix 13
13
A
384 395Right-handed alpha
Helix 14
14
A
397 410Right-handed alpha
Helix 15
15
A
412 421Right-handed alpha
Helix 16
16
A
424 429Right-handed 310
Helix 17
17
A
431 454Right-handed alpha
Helix 18
18
A
455 475Right-handed alpha
Helix 19
19
B
9 26Right-handed alpha
Helix 20
20
B
38 51Right-handed alpha
Helix 21
21
B
62 73Right-handed alpha
Helix 22
22
B
77 89Right-handed alpha
Helix 23
23
B
125 132Right-handed alpha
Helix 24
24
B
160 166Right-handed alpha
Helix 25
25
B
182 196Right-handed alpha
Helix 26
26
B
200 208Right-handed alpha
Helix 27
27
B
221 232Right-handed alpha
Helix 28
28
B
264 278Right-handed alpha
Helix 29
29
B
307 319Right-handed alpha
Helix 30
30
B
341 384Right-handed alpha
Helix 31
31
B
384 395Right-handed alpha
Helix 32
32
B
397 410Right-handed alpha
Helix 33
33
B
412 422Right-handed alpha
Helix 34
34
B
424 429Right-handed 310
Helix 35
35
B
431 454Right-handed alpha
Helix 36
36
B
455 475Right-handed alpha
Helix 37
37
C
434 444Right-handed alpha
Helix 38
38
C
466 473Right-handed alpha
Helix 39
39
C
473 484Right-handed alpha
Helix 40
40
C
508 525Right-handed alpha
Helix 41
41
C
526 532Right-handed alpha
Helix 42
42
C
560 572Right-handed alpha
Helix 43
43
C
582 586Right-handed 310
Helix 44
44
C
587 596Right-handed alpha
Helix 45
45
C
611 623Right-handed alpha
Helix 46
46
C
626 637Right-handed alpha
Helix 47
47
D
434 444Right-handed alpha
Helix 48
48
D
466 473Right-handed alpha
Helix 49
49
D
473 484Right-handed alpha
Helix 50
50
D
508 525Right-handed alpha
Helix 51
51
D
526 532Right-handed alpha
Helix 52
52
D
560 572Right-handed alpha
Helix 53
53
D
582 586Right-handed 310
Helix 54
54
D
587 596Right-handed alpha
Helix 55
55
D
611 623Right-handed alpha
Helix 56
56
D
626 637Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 3LTN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
C
603 607parallel
Strand 3
C
535 538anti-parallel
Strand 4
C
500 504parallel
Strand 5
C
428 433parallel
Strand 6
C
450 455parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
120 123anti-parallel
Strand 3
A
99 102anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
150 152anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 328first strand
Strand 2
A
233 239anti-parallel
Strand 3
A
217 220anti-parallel
Strand 4
A
480 482parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 247first strand
Strand 2
A
251 256anti-parallel
Strand 3
A
298 301anti-parallel
Strand 4
A
286 289anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 333first strand
Strand 2
A
336 339anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
D
603 607parallel
Strand 3
D
535 538anti-parallel
Strand 4
D
500 504parallel
Strand 5
D
428 433parallel
Strand 6
D
450 455parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
120 123anti-parallel
Strand 3
B
99 102anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
150 152anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 170first strand
Strand 2
B
175 178anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
322 328first strand
Strand 2
B
233 239anti-parallel
Strand 3
B
217 220anti-parallel
Strand 4
B
480 482parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 247first strand
Strand 2
B
251 256anti-parallel
Strand 3
B
298 301anti-parallel
Strand 4
B
286 289anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 333first strand
Strand 2
B
336 339anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
554 558first strand
Strand 2
C
543 547anti-parallel
Strand 3
C
576 579anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
554 558first strand
Strand 2
D
543 547anti-parallel
Strand 3
D
576 579anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il