Analysis of interatomic Contacts of Structural Units in PDB entry:
3LUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LUL entry

There are 4 chains in PDB entry 3LUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 139
A
 SER 141GLU 270
B
 MSE 1LEU 139
B
 SER 141SER 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 3LUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed 310
Helix 2
2
A
41 57Right-handed alpha
Helix 3
3
A
63 78Right-handed alpha
Helix 4
4
A
134 139Right-handed 310
Helix 5
5
A
144 157Right-handed alpha
Helix 6
6
A
191 195Right-handed 310
Helix 7
7
A
199 212Right-handed alpha
Helix 8
8
A
222 228Right-handed alpha
Helix 9
9
A
256 270Right-handed alpha
Helix 10
10
B
20 25Right-handed 310
Helix 11
11
B
41 57Right-handed alpha
Helix 12
12
B
63 78Right-handed alpha
Helix 13
13
B
134 139Right-handed 310
Helix 14
14
B
144 157Right-handed alpha
Helix 15
15
B
191 195Right-handed 310
Helix 16
16
B
199 212Right-handed alpha
Helix 17
17
B
222 228Right-handed alpha
Helix 18
18
B
256 269Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3LUL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
105 112parallel
Strand 3
A
83 90anti-parallel
Strand 4
A
27 35anti-parallel
Strand 5
A
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
186 189parallel
Strand 3
A
178 183anti-parallel
Strand 4
A
171 174anti-parallel
Strand 5
A
161 166anti-parallel
Strand 6
A
121 130parallel
Strand 7
A
240 247parallel
Strand 8
A
250 251anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
186 189parallel
Strand 3
A
178 183anti-parallel
Strand 4
A
231 236anti-parallel
Strand 5
A
240 247anti-parallel
Strand 6
A
250 251anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
105 112parallel
Strand 3
B
83 90anti-parallel
Strand 4
B
27 35anti-parallel
Strand 5
B
38 39anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
186 189parallel
Strand 3
B
178 183anti-parallel
Strand 4
B
171 174anti-parallel
Strand 5
B
161 166anti-parallel
Strand 6
B
121 130parallel
Strand 7
B
240 247parallel
Strand 8
B
250 251anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
186 189parallel
Strand 3
B
178 183anti-parallel
Strand 4
B
231 236anti-parallel
Strand 5
B
240 247anti-parallel
Strand 6
B
250 251anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il