Analysis of interatomic Contacts of Structural Units in PDB entry:
3LUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LUQ entry

There are 4 chains in PDB entry 3LUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 87THR 200
B
 SER 87THR 200
C
 SER 87THR 200
D
 ASP 88ILE 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3LUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 97Right-handed alpha
Helix 2
2
A
115 122Right-handed alpha
Helix 3
3
A
133 138Right-handed alpha
Helix 4
4
A
142 154Right-handed alpha
Helix 5
5
B
87 97Right-handed alpha
Helix 6
6
B
115 123Right-handed alpha
Helix 7
7
B
133 138Right-handed alpha
Helix 8
8
B
142 154Right-handed alpha
Helix 9
9
C
87 97Right-handed alpha
Helix 10
10
C
115 122Right-handed alpha
Helix 11
11
C
133 138Right-handed alpha
Helix 12
12
C
142 154Right-handed alpha
Helix 13
13
D
88 97Right-handed alpha
Helix 14
14
D
115 122Right-handed alpha
Helix 15
15
D
133 138Right-handed alpha
Helix 16
16
D
142 154Right-handed alpha
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There are 4 sheets in PDB entry 3LUQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
189 198anti-parallel
Strand 4
A
172 183anti-parallel
Strand 5
A
158 166anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
101 105anti-parallel
Strand 3
B
189 198anti-parallel
Strand 4
B
173 183anti-parallel
Strand 5
B
158 165anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
101 106anti-parallel
Strand 3
C
189 198anti-parallel
Strand 4
C
172 183anti-parallel
Strand 5
C
158 166anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 114first strand
Strand 2
D
102 106anti-parallel
Strand 3
D
189 198anti-parallel
Strand 4
D
172 183anti-parallel
Strand 5
D
158 166anti-parallel
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