Analysis of interatomic Contacts of Structural Units in PDB entry:
3LUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LUY entry

There is 1 chain in PDB entry 3LUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1TRP 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3LUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
28 31Right-handed 310
Helix 3
3
A
42 53Right-handed alpha
Helix 4
4
A
69 78Right-handed alpha
Helix 5
5
A
103 107Right-handed 310
Helix 6
6
A
113 120Right-handed alpha
Helix 7
7
A
120 127Right-handed alpha
Helix 8
8
A
136 143Right-handed alpha
Helix 9
9
A
155 160Right-handed alpha
Helix 10
10
A
184 192Right-handed alpha
Helix 11
11
A
192 198Right-handed alpha
Helix 12
12
A
217 229Right-handed alpha
Helix 13
13
A
260 273Right-handed alpha
Helix 14
14
A
292 296Right-handed 310
Helix 15
15
A
313 316Right-handed 310
Helix 16
16
A
317 325Right-handed alpha
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There are 4 sheets in PDB entry 3LUY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
56 63parallel
Strand 4
A
67 68anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
56 63parallel
Strand 4
A
176 183anti-parallel
Strand 5
A
83 91anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
109 112parallel
Strand 3
A
148 152parallel
Strand 4
A
95 99anti-parallel
Strand 5
A
162 166anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 241first strand
Strand 2
A
244 254anti-parallel
Strand 3
A
203 210anti-parallel
Strand 4
A
276 284anti-parallel
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