Analysis of interatomic Contacts of Structural Units in PDB entry:
3LVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LVS entry

There are 2 chains in PDB entry 3LVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ASP 287
B
 SER 0GLU 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3LVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 23Right-handed alpha
Helix 2
2
A
27 37Right-handed alpha
Helix 3
3
A
42 54Right-handed alpha
Helix 4
4
A
58 81Right-handed alpha
Helix 5
5
A
96 101Right-handed alpha
Helix 6
6
A
102 121Right-handed alpha
Helix 7
7
A
122 127Right-handed 310
Helix 8
8
A
128 144Right-handed alpha
Helix 9
9
A
147 159Right-handed alpha
Helix 10
10
A
168 178Right-handed alpha
Helix 11
11
A
178 192Right-handed alpha
Helix 12
12
A
197 220Right-handed alpha
Helix 13
13
A
241 266Right-handed alpha
Helix 14
14
A
267 272Right-handed 310
Helix 15
15
A
273 286Right-handed alpha
Helix 16
16
B
0 23Right-handed alpha
Helix 17
17
B
27 37Right-handed alpha
Helix 18
18
B
42 54Right-handed alpha
Helix 19
19
B
58 81Right-handed alpha
Helix 20
20
B
96 101Right-handed alpha
Helix 21
21
B
102 121Right-handed alpha
Helix 22
22
B
122 127Right-handed 310
Helix 23
23
B
128 144Right-handed alpha
Helix 24
24
B
147 159Right-handed alpha
Helix 25
25
B
166 178Right-handed alpha
Helix 26
26
B
178 194Right-handed alpha
Helix 27
27
B
197 221Right-handed alpha
Helix 28
28
B
241 247Right-handed alpha
Helix 29
29
B
247 266Right-handed alpha
Helix 30
30
B
267 272Right-handed 310
Helix 31
31
B
273 285Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3LVS.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 91first strand
Strand 2
B
94 95anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il