Analysis of interatomic Contacts of Structural Units in PDB entry:
3LVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LVW entry

There is 1 chain in PDB entry 3LVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2SER 673
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3LVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
18 38Right-handed alpha
Helix 3
3
A
73 78Right-handed alpha
Helix 4
4
A
82 89Right-handed alpha
Helix 5
5
A
116 143Right-handed alpha
Helix 6
6
A
187 191Right-handed 310
Helix 7
7
A
195 209Right-handed alpha
Helix 8
8
A
239 241Right-handed 310
Helix 9
9
A
242 248Right-handed alpha
Helix 10
10
A
257 261Right-handed 310
Helix 11
11
A
275 287Right-handed alpha
Helix 12
12
A
288 297Right-handed alpha
Helix 13
13
A
313 321Right-handed alpha
Helix 14
14
A
339 343Right-handed 310
Helix 15
15
A
347 354Right-handed 310
Helix 16
16
A
376 380Right-handed 310
Helix 17
17
A
387 396Right-handed alpha
Helix 18
18
A
403 414Right-handed alpha
Helix 19
19
A
423 427Right-handed 310
Helix 20
20
A
434 442Right-handed alpha
Helix 21
21
A
479 500Right-handed alpha
Helix 22
22
A
509 520Right-handed alpha
Helix 23
23
A
524 529Right-handed alpha
Helix 24
24
A
550 556Right-handed alpha
Helix 25
25
A
560 565Right-handed alpha
Helix 26
26
A
565 573Right-handed alpha
Helix 27
27
A
579 586Right-handed 310
Helix 28
28
A
589 604Right-handed alpha
Helix 29
29
A
609 621Right-handed alpha
Helix 30
30
A
631 647Right-handed alpha
Helix 31
31
A
653 660Right-handed alpha
Helix 32
32
A
660 670Right-handed alpha
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There are 6 sheets in PDB entry 3LVW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 94first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
46 59anti-parallel
Strand 4
A
110 111anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 111first strand
Strand 2
A
46 59anti-parallel
Strand 3
A
268 272anti-parallel
Strand 4
A
468 471anti-parallel
Strand 5
A
448 451anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
46 59anti-parallel
Strand 3
A
149 154anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
252 255anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
306 307anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 534first strand
Strand 2
A
545 549anti-parallel
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