Analysis of interatomic Contacts of Structural Units in PDB entry:
3LW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LW5 entry

There are 18 chains in PDB entry 3LW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 21GLY 758
B
 ALA 2GLY 734
C
 MET 1TYR 81
D
 GLU 73LEU 210
E
 ILE 66GLU 129
F
 ASP 78PHE 231
G
 SER 60PHE 154
H
 ASP 54PRO 122
I
 MET 1LYS 30
J
 MET 1PHE 42
K
 ASP 47LEU 130
L
 LYS 51TYR 211
N
 GLY 86TRP 170
R
 UNK 1UNK 53
1
 SER 57HIS 226
2
 SER 94LYS 269
3
 SER 84ASN 255
4
 LEU 81GLN 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are111 helices in PDB entry 3LW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 56Right-handed alpha
Helix 2
2
A
73 90Right-handed alpha
Helix 3
3
A
90 101Right-handed alpha
Helix 4
4
A
105 112Right-handed alpha
Helix 5
5
A
152 156Right-handed 310
Helix 6
6
A
160 165Right-handed alpha
Helix 7
7
A
166 174Right-handed alpha
Helix 8
8
A
193 198Right-handed alpha
Helix 9
9
A
202 207Right-handed alpha
Helix 10
10
A
215 220Right-handed alpha
Helix 11
11
A
227 231Right-handed 310
Helix 12
12
A
297 311Right-handed alpha
Helix 13
13
A
327 332Right-handed alpha
Helix 14
14
A
340 344Right-handed 310
Helix 15
15
A
348 353Right-handed 310
Helix 16
16
A
355 368Right-handed alpha
Helix 17
17
A
371 378Right-handed alpha
Helix 18
18
A
388 392Right-handed 310
Helix 19
19
A
393 399Right-handed alpha
Helix 20
20
A
401 406Right-handed alpha
Helix 21
21
A
408 420Right-handed alpha
Helix 22
22
A
430 438Right-handed alpha
Helix 23
23
A
446 456Right-handed alpha
Helix 24
24
A
458 469Right-handed alpha
Helix 25
25
A
492 497Right-handed alpha
Helix 26
26
A
540 562Right-handed alpha
Helix 27
27
A
599 623Right-handed alpha
Helix 28
28
A
629 633Right-handed 310
Helix 29
29
A
641 645Right-handed 310
Helix 30
30
A
650 655Right-handed alpha
Helix 31
31
A
685 687Right-handed 310
Helix 32
32
A
688 694Right-handed alpha
Helix 33
33
A
697 714Right-handed alpha
Helix 34
34
A
727 733Right-handed alpha
Helix 35
35
A
735 751Right-handed alpha
Helix 36
36
B
10 15Right-handed alpha
Helix 37
37
B
18 25Right-handed alpha
Helix 38
38
B
38 48Right-handed alpha
Helix 39
39
B
51 67Right-handed alpha
Helix 40
40
B
120 125Right-handed alpha
Helix 41
41
B
138 147Right-handed alpha
Helix 42
42
B
147 156Right-handed alpha
Helix 43
43
B
165 170Right-handed 310
Helix 44
44
B
177 182Right-handed alpha
Helix 45
45
B
182 197Right-handed alpha
Helix 46
46
B
198 203Right-handed alpha
Helix 47
47
B
223 227Right-handed 310
Helix 48
48
B
271 288Right-handed alpha
Helix 49
49
B
321 328Right-handed alpha
Helix 50
50
B
332 337Right-handed alpha
Helix 51
51
B
340 352Right-handed alpha
Helix 52
52
B
380 390Right-handed alpha
Helix 53
53
B
399 404Right-handed alpha
Helix 54
54
B
414 419Right-handed alpha
Helix 55
55
B
422 444Right-handed alpha
Helix 56
56
B
457 463Right-handed alpha
Helix 57
57
B
515 523Right-handed alpha
Helix 58
58
B
525 540Right-handed alpha
Helix 59
59
B
572 580Right-handed alpha
Helix 60
60
B
585 594Right-handed alpha
Helix 61
61
B
598 603Right-handed alpha
Helix 62
62
B
606 613Right-handed alpha
Helix 63
63
B
628 633Right-handed 310
Helix 64
64
B
644 659Right-handed alpha
Helix 65
65
B
661 666Right-handed alpha
Helix 66
66
B
668 679Right-handed alpha
Helix 67
67
B
681 685Right-handed 310
Helix 68
68
B
703 709Right-handed alpha
Helix 69
69
B
712 727Right-handed alpha
Helix 70
70
D
134 143Right-handed alpha
Helix 71
71
D
144 146Right-handed 310
Helix 72
72
F
88 104Right-handed alpha
Helix 73
73
F
123 128Right-handed alpha
Helix 74
74
F
161 171Right-handed alpha
Helix 75
75
F
193 197Right-handed 310
Helix 76
76
F
200 210Right-handed 310
Helix 77
77
F
216 221Right-handed alpha
Helix 78
78
G
62 74Right-handed alpha
Helix 79
79
G
118 121Right-handed 310
Helix 80
80
G
122 129Right-handed alpha
Helix 81
81
H
100 114Right-handed alpha
Helix 82
82
I
14 24Right-handed alpha
Helix 83
83
J
14 18Right-handed 310
Helix 84
84
J
21 25Right-handed 310
Helix 85
85
K
47 50Right-handed 310
Helix 86
86
K
51 73Right-handed alpha
Helix 87
87
K
99 118Right-handed alpha
Helix 88
88
L
76 82Right-handed alpha
Helix 89
89
L
94 96Right-handed 310
Helix 90
90
L
97 106Right-handed alpha
Helix 91
91
L
131 145Right-handed alpha
Helix 92
92
L
146 149Right-handed 310
Helix 93
93
L
178 194Right-handed alpha
Helix 94
94
L
197 202Right-handed alpha
Helix 95
95
R
7 27Right-handed alpha
Helix 96
96
1
70 97Right-handed alpha
Helix 97
97
1
133 154Right-handed alpha
Helix 98
98
1
186 199Right-handed alpha
Helix 99
99
1
200 205Right-handed alpha
Helix 100
100
2
103 127Right-handed alpha
Helix 101
101
2
128 130Right-handed 310
Helix 102
102
2
150 173Right-handed alpha
Helix 103
103
2
217 242Right-handed alpha
Helix 104
104
3
96 111Right-handed alpha
Helix 105
105
3
160 176Right-handed alpha
Helix 106
106
3
226 234Right-handed alpha
Helix 107
107
3
235 243Right-handed alpha
Helix 108
108
4
88 109Right-handed alpha
Helix 109
109
4
140 162Right-handed alpha
Helix 110
110
4
179 184Right-handed alpha
Helix 111
111
4
202 222Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3LW5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 121first strand
Strand 2
A
143 144anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 103first strand
Strand 2
D
153 154anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 112first strand
Strand 2
D
120 121anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
89 90first strand
Strand 2
E
105 106anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il