Analysis of interatomic Contacts of Structural Units in PDB entry:
3LWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LWU entry

There is 1 chain in PDB entry 3LWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3LWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 62Right-handed alpha
Helix 2
2
A
77 82Right-handed alpha
Helix 3
3
A
100 104Right-handed 310
Helix 4
4
A
111 120Right-handed alpha
Helix 5
5
A
123 142Right-handed alpha
Helix 6
6
A
143 145Right-handed 310
Helix 7
7
A
150 164Right-handed alpha
Helix 8
8
A
187 195Right-handed 310
Helix 9
9
A
210 229Right-handed alpha
Helix 10
10
A
251 269Right-handed alpha
Helix 11
11
A
324 327Right-handed 310
Helix 12
12
A
329 331Right-handed 310
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There are 3 sheets in PDB entry 3LWU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 13first strand
Strand 2
A
19 27anti-parallel
Strand 3
A
70 73anti-parallel
Strand 4
A
37 41parallel
Strand 5
A
168 175parallel
Strand 6
A
238 246parallel
Strand 7
A
181 185anti-parallel
Strand 8
A
199 203parallel
Strand 9
A
284 287parallel
Strand 10
A
367 368anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
343 347anti-parallel
Strand 3
A
358 363anti-parallel
Strand 4
A
291 295anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 337first strand
Strand 2
A
317 322anti-parallel
Strand 3
A
300 304anti-parallel
Strand 4
A
352 353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il