Analysis of interatomic Contacts of Structural Units in PDB entry:
3LWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LWX entry

There is 1 chain in PDB entry 3LWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ASN 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3LWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 95Right-handed alpha
Helix 2
2
A
100 111Right-handed alpha
Helix 3
3
A
133 140Right-handed alpha
Helix 4
4
A
196 201Right-handed 310
Helix 5
5
A
202 207Right-handed alpha
Helix 6
6
A
208 210Right-handed 310
Helix 7
7
A
244 268Right-handed alpha
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There are 3 sheets in PDB entry 3LWX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
112 119anti-parallel
Strand 3
A
142 150anti-parallel
Strand 4
A
153 163anti-parallel
Strand 5
A
168 175anti-parallel
Strand 6
A
182 189anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
219 220anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 226first strand
Strand 2
A
237 239parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il