Analysis of interatomic Contacts of Structural Units in PDB entry:
3LWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LWZ entry

There are 4 chains in PDB entry 3LWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4SER 149
B
 LYS 4LYS 148
C
 MET 1LYS 148
D
 ASP 3SER 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3LWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
22 27Right-handed alpha
Helix 3
3
A
30 45Right-handed alpha
Helix 4
4
A
56 68Right-handed alpha
Helix 5
5
A
78 84Right-handed 310
Helix 6
6
A
85 96Right-handed alpha
Helix 7
7
A
106 110Right-handed 310
Helix 8
8
A
111 116Right-handed 310
Helix 9
9
A
119 123Right-handed 310
Helix 10
10
A
132 149Right-handed alpha
Helix 11
11
B
14 18Right-handed 310
Helix 12
12
B
22 27Right-handed alpha
Helix 13
13
B
30 45Right-handed alpha
Helix 14
14
B
56 68Right-handed alpha
Helix 15
15
B
78 83Right-handed 310
Helix 16
16
B
85 96Right-handed alpha
Helix 17
17
B
111 116Right-handed 310
Helix 18
18
B
119 123Right-handed 310
Helix 19
19
B
132 148Right-handed alpha
Helix 20
20
C
14 18Right-handed 310
Helix 21
21
C
22 27Right-handed alpha
Helix 22
22
C
30 45Right-handed alpha
Helix 23
23
C
56 67Right-handed alpha
Helix 24
24
C
78 84Right-handed 310
Helix 25
25
C
85 96Right-handed alpha
Helix 26
26
C
106 110Right-handed 310
Helix 27
27
C
111 116Right-handed 310
Helix 28
28
C
132 148Right-handed alpha
Helix 29
29
D
14 18Right-handed 310
Helix 30
30
D
22 27Right-handed alpha
Helix 31
31
D
30 45Right-handed alpha
Helix 32
32
D
56 67Right-handed alpha
Helix 33
33
D
78 84Right-handed 310
Helix 34
34
D
85 96Right-handed alpha
Helix 35
35
D
111 116Right-handed 310
Helix 36
36
D
132 149Right-handed alpha
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There are 3 sheets in PDB entry 3LWZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 53first strand
Strand 2
A
5 11parallel
Strand 3
A
73 77parallel
Strand 4
A
99 103parallel
Strand 5
A
125 128parallel
Strand 6
D
125 128anti-parallel
Strand 7
D
99 103parallel
Strand 8
D
73 77parallel
Strand 9
D
6 11parallel
Strand 10
D
48 53parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 53first strand
Strand 2
B
5 11parallel
Strand 3
B
73 77parallel
Strand 4
B
99 103parallel
Strand 5
B
125 128parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 53first strand
Strand 2
C
6 11parallel
Strand 3
C
73 77parallel
Strand 4
C
99 103parallel
Strand 5
C
125 128parallel
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