Analysis of interatomic Contacts of Structural Units in PDB entry:
3LX2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LX2 entry

There are 3 chains in PDB entry 3LX2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2VAL 248
B
 THR 2ARG 247
C
 THR 2ARG 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 3LX2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
56 58Right-handed 310
Helix 3
3
A
73 81Right-handed alpha
Helix 4
4
A
138 152Right-handed alpha
Helix 5
5
A
202 210Right-handed alpha
Helix 6
6
B
9 24Right-handed alpha
Helix 7
7
B
56 58Right-handed 310
Helix 8
8
B
73 81Right-handed alpha
Helix 9
9
B
138 150Right-handed alpha
Helix 10
10
B
202 210Right-handed alpha
Helix 11
11
C
9 22Right-handed alpha
Helix 12
12
C
56 58Right-handed 310
Helix 13
13
C
73 81Right-handed alpha
Helix 14
14
C
138 150Right-handed alpha
Helix 15
15
C
202 210Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3LX2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 63first strand
Strand 2
A
3 7anti-parallel
Strand 3
A
88 93anti-parallel
Strand 4
A
98 104anti-parallel
Strand 5
A
108 114anti-parallel
Strand 6
B
174 180anti-parallel
Strand 7
B
163 169anti-parallel
Strand 8
B
154 159anti-parallel
Strand 9
B
196 201anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
26 31anti-parallel
Strand 3
A
35 41anti-parallel
Strand 4
A
47 54anti-parallel
Strand 5
A
238 244anti-parallel
Strand 6
A
228 234anti-parallel
Strand 7
A
217 222anti-parallel
Strand 8
A
132 137anti-parallel
Strand 9
A
186 191anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 201first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
164 169anti-parallel
Strand 4
A
174 179anti-parallel
Strand 5
C
108 114anti-parallel
Strand 6
C
98 104anti-parallel
Strand 7
C
88 93anti-parallel
Strand 8
C
3 7anti-parallel
Strand 9
C
61 63anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
3 7anti-parallel
Strand 3
B
88 93anti-parallel
Strand 4
B
98 104anti-parallel
Strand 5
B
108 114anti-parallel
Strand 6
C
174 180anti-parallel
Strand 7
C
163 169anti-parallel
Strand 8
C
154 159anti-parallel
Strand 9
C
196 201anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
26 31anti-parallel
Strand 3
B
35 41anti-parallel
Strand 4
B
47 54anti-parallel
Strand 5
B
238 244anti-parallel
Strand 6
B
228 234anti-parallel
Strand 7
B
217 222anti-parallel
Strand 8
B
132 137anti-parallel
Strand 9
B
186 191anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 72first strand
Strand 2
C
26 31anti-parallel
Strand 3
C
35 41anti-parallel
Strand 4
C
47 54anti-parallel
Strand 5
C
238 244anti-parallel
Strand 6
C
228 234anti-parallel
Strand 7
C
217 222anti-parallel
Strand 8
C
132 137anti-parallel
Strand 9
C
186 191anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il