Analysis of interatomic Contacts of Structural Units in PDB entry:
3LX4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LX4 entry

There are 2 chains in PDB entry 3LX4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 25VAL 450
B
 LEU 25VAL 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 3LX4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 37Right-handed alpha
Helix 2
2
A
52 59Right-handed alpha
Helix 3
3
A
60 64Right-handed 310
Helix 4
4
A
71 82Right-handed alpha
Helix 5
5
A
90 114Right-handed alpha
Helix 6
6
A
130 141Right-handed alpha
Helix 7
7
A
142 148Right-handed 310
Helix 8
8
A
153 171Right-handed alpha
Helix 9
9
A
173 175Right-handed 310
Helix 10
10
A
187 193Right-handed alpha
Helix 11
11
A
214 224Right-handed alpha
Helix 12
12
A
227 231Right-handed 310
Helix 13
13
A
255 270Right-handed alpha
Helix 14
14
A
300 309Right-handed alpha
Helix 15
15
A
351 364Right-handed alpha
Helix 16
16
A
380 384Right-handed 310
Helix 17
17
A
394 402Right-handed alpha
Helix 18
18
A
405 410Right-handed alpha
Helix 19
19
A
414 417Right-handed 310
Helix 20
20
A
418 428Right-handed alpha
Helix 21
21
A
434 442Right-handed alpha
Helix 22
22
B
26 37Right-handed alpha
Helix 23
23
B
52 59Right-handed alpha
Helix 24
24
B
60 64Right-handed 310
Helix 25
25
B
71 82Right-handed alpha
Helix 26
26
B
90 114Right-handed alpha
Helix 27
27
B
130 141Right-handed alpha
Helix 28
28
B
142 148Right-handed 310
Helix 29
29
B
153 171Right-handed alpha
Helix 30
30
B
173 175Right-handed 310
Helix 31
31
B
187 193Right-handed alpha
Helix 32
32
B
214 224Right-handed alpha
Helix 33
33
B
227 231Right-handed 310
Helix 34
34
B
255 270Right-handed alpha
Helix 35
35
B
300 309Right-handed alpha
Helix 36
36
B
351 364Right-handed alpha
Helix 37
37
B
380 384Right-handed 310
Helix 38
38
B
394 403Right-handed alpha
Helix 39
39
B
405 410Right-handed alpha
Helix 40
40
B
414 417Right-handed 310
Helix 41
41
B
418 428Right-handed alpha
Helix 42
42
B
434 442Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3LX4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
46 51parallel
Strand 3
A
177 183parallel
Strand 4
A
210 213parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
371 375parallel
Strand 3
A
341 350parallel
Strand 4
A
287 294anti-parallel
Strand 5
A
279 280anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
371 375parallel
Strand 3
A
341 350parallel
Strand 4
A
331 333anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
46 51parallel
Strand 3
B
177 183parallel
Strand 4
B
210 213parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 126first strand
Strand 2
B
371 375parallel
Strand 3
B
341 350parallel
Strand 4
B
287 294anti-parallel
Strand 5
B
279 280anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 126first strand
Strand 2
B
371 375parallel
Strand 3
B
341 350parallel
Strand 4
B
331 333anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il