Analysis of interatomic Contacts of Structural Units in PDB entry:
3LYE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LYE entry

There is 1 chain in PDB entry 3LYE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 69GLY 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3LYE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 84Right-handed alpha
Helix 2
2
A
95 105Right-handed alpha
Helix 3
3
A
113 123Right-handed alpha
Helix 4
4
A
131 144Right-handed alpha
Helix 5
5
A
162 176Right-handed alpha
Helix 6
6
A
202 220Right-handed alpha
Helix 7
7
A
232 237Right-handed alpha
Helix 8
8
A
237 251Right-handed alpha
Helix 9
9
A
263 275Right-handed alpha
Helix 10
10
A
293 301Right-handed alpha
Helix 11
11
A
311 330Right-handed alpha
Helix 12
12
A
339 347Right-handed alpha
Helix 13
13
A
348 359Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3LYE.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 258first strand
Strand 2
A
225 230parallel
Strand 3
A
180 183parallel
Strand 4
A
152 155parallel
Strand 5
A
110 112parallel
Strand 6
A
88 93parallel
Strand 7
A
304 308parallel
Strand 8
A
280 284parallel
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