Analysis of interatomic Contacts of Structural Units in PDB entry:
3LZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3LZZ entry

There are 2 chains in PDB entry 3LZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10SER 170
B
 GLU 10SER 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 3LZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 20Right-handed alpha
Helix 2
2
A
141 145Right-handed 310
Helix 3
3
A
149 157Right-handed alpha
Helix 4
4
A
160 167Right-handed alpha
Helix 5
5
B
11 20Right-handed alpha
Helix 6
6
B
141 145Right-handed 310
Helix 7
7
B
149 157Right-handed alpha
Helix 8
8
B
160 167Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 3LZZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
30 36anti-parallel
Strand 3
A
54 61anti-parallel
Strand 4
A
129 137anti-parallel
Strand 5
A
74 82anti-parallel
Strand 6
A
113 116anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 101first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
121 126anti-parallel
Strand 4
A
66 70anti-parallel
Strand 5
A
146 147anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
29 36anti-parallel
Strand 3
B
54 61anti-parallel
Strand 4
B
129 137anti-parallel
Strand 5
B
74 82anti-parallel
Strand 6
B
113 116anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
50 51anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 101first strand
Strand 2
B
85 90anti-parallel
Strand 3
B
121 126anti-parallel
Strand 4
B
66 70anti-parallel
Strand 5
B
146 147anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il