Analysis of interatomic Contacts of Structural Units in PDB entry:
3M0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M0M entry

There are 4 chains in PDB entry 3M0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4ALA 424
B
 PHE 4ALA 424
C
 GLU 3HIS 433
D
 GLU 3ALA 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 3M0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 36Right-handed alpha
Helix 2
2
A
39 48Right-handed alpha
Helix 3
3
A
57 59Right-handed 310
Helix 4
4
A
77 93Right-handed alpha
Helix 5
5
A
108 120Right-handed alpha
Helix 6
6
A
150 172Right-handed alpha
Helix 7
7
A
191 209Right-handed alpha
Helix 8
8
A
234 246Right-handed alpha
Helix 9
9
A
263 274Right-handed alpha
Helix 10
10
A
298 315Right-handed alpha
Helix 11
11
A
334 356Right-handed alpha
Helix 12
12
A
357 367Right-handed alpha
Helix 13
13
A
369 382Right-handed alpha
Helix 14
14
A
385 396Right-handed alpha
Helix 15
15
A
401 410Right-handed alpha
Helix 16
16
A
410 419Right-handed alpha
Helix 17
17
B
7 36Right-handed alpha
Helix 18
18
B
39 49Right-handed alpha
Helix 19
19
B
57 59Right-handed 310
Helix 20
20
B
76 93Right-handed alpha
Helix 21
21
B
108 120Right-handed alpha
Helix 22
22
B
150 172Right-handed alpha
Helix 23
23
B
191 209Right-handed alpha
Helix 24
24
B
234 246Right-handed alpha
Helix 25
25
B
263 274Right-handed alpha
Helix 26
26
B
298 316Right-handed alpha
Helix 27
27
B
334 356Right-handed alpha
Helix 28
28
B
357 367Right-handed alpha
Helix 29
29
B
369 382Right-handed alpha
Helix 30
30
B
385 396Right-handed alpha
Helix 31
31
B
401 410Right-handed alpha
Helix 32
32
B
410 419Right-handed alpha
Helix 33
33
C
7 36Right-handed alpha
Helix 34
34
C
39 48Right-handed alpha
Helix 35
35
C
57 59Right-handed 310
Helix 36
36
C
77 93Right-handed alpha
Helix 37
37
C
108 120Right-handed alpha
Helix 38
38
C
150 172Right-handed alpha
Helix 39
39
C
191 208Right-handed alpha
Helix 40
40
C
234 246Right-handed alpha
Helix 41
41
C
256 258Right-handed 310
Helix 42
42
C
263 274Right-handed alpha
Helix 43
43
C
298 315Right-handed alpha
Helix 44
44
C
334 356Right-handed alpha
Helix 45
45
C
357 367Right-handed alpha
Helix 46
46
C
369 382Right-handed alpha
Helix 47
47
C
385 396Right-handed alpha
Helix 48
48
C
401 410Right-handed alpha
Helix 49
49
C
410 419Right-handed alpha
Helix 50
50
D
7 36Right-handed alpha
Helix 51
51
D
39 48Right-handed alpha
Helix 52
52
D
57 59Right-handed 310
Helix 53
53
D
77 93Right-handed alpha
Helix 54
54
D
108 120Right-handed alpha
Helix 55
55
D
150 172Right-handed alpha
Helix 56
56
D
191 209Right-handed alpha
Helix 57
57
D
234 246Right-handed alpha
Helix 58
58
D
256 258Right-handed 310
Helix 59
59
D
263 274Right-handed alpha
Helix 60
60
D
298 316Right-handed alpha
Helix 61
61
D
334 356Right-handed alpha
Helix 62
62
D
357 367Right-handed alpha
Helix 63
63
D
369 382Right-handed alpha
Helix 64
64
D
385 396Right-handed alpha
Helix 65
65
D
401 410Right-handed alpha
Helix 66
66
D
410 419Right-handed alpha
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There are 9 sheets in PDB entry 3M0M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
97 101parallel
Strand 3
A
122 127parallel
Strand 4
A
175 178parallel
Strand 5
A
215 219parallel
Strand 6
A
249 254parallel
Strand 7
A
277 282parallel
Strand 8
A
323 326parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 184first strand
Strand 2
A
229 230anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 55first strand
Strand 2
B
97 101parallel
Strand 3
B
122 127parallel
Strand 4
B
175 178parallel
Strand 5
B
215 219parallel
Strand 6
B
249 254parallel
Strand 7
B
277 282parallel
Strand 8
B
323 326parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 184first strand
Strand 2
B
229 230anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 55first strand
Strand 2
C
97 99parallel
Strand 3
C
122 123parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
175 178parallel
Strand 3
C
215 219parallel
Strand 4
C
249 254parallel
Strand 5
C
277 282parallel
Strand 6
C
323 326parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 184first strand
Strand 2
C
229 230anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 55first strand
Strand 2
D
97 101parallel
Strand 3
D
122 127parallel
Strand 4
D
175 178parallel
Strand 5
D
215 219parallel
Strand 6
D
249 254parallel
Strand 7
D
277 282parallel
Strand 8
D
323 326parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
183 184first strand
Strand 2
D
229 230anti-parallel
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