Analysis of interatomic Contacts of Structural Units in PDB entry:
3M16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M16 entry

There is 1 chain in PDB entry 3M16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ARG 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3M16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 13Right-handed alpha
Helix 2
2
A
24 32Right-handed alpha
Helix 3
3
A
39 48Right-handed alpha
Helix 4
4
A
49 51Right-handed 310
Helix 5
5
A
52 67Right-handed alpha
Helix 6
6
A
74 94Right-handed alpha
Helix 7
7
A
105 109Right-handed 310
Helix 8
8
A
111 129Right-handed alpha
Helix 9
9
A
132 134Right-handed 310
Helix 10
10
A
143 156Right-handed alpha
Helix 11
11
A
167 177Right-handed alpha
Helix 12
12
A
185 195Right-handed alpha
Helix 13
13
A
207 223Right-handed alpha
Helix 14
14
A
236 242Right-handed alpha
Helix 15
15
A
252 262Right-handed alpha
Helix 16
16
A
284 295Right-handed alpha
Helix 17
17
A
295 326Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3M16.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
35 37parallel
Strand 3
A
100 103parallel
Strand 4
A
136 141parallel
Strand 5
A
160 165parallel
Strand 6
A
181 184parallel
Strand 7
A
228 231parallel
Strand 8
A
248 251parallel
Strand 9
A
17 21parallel
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