Analysis of interatomic Contacts of Structural Units in PDB entry:
3M1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M1G entry

There are 3 chains in PDB entry 3M1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 26GLN 358
B
 ASN 26GLN 358
C
 ASN 26LYS 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3M1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 81Right-handed alpha
Helix 2
2
A
150 161Right-handed alpha
Helix 3
3
A
162 166Right-handed 310
Helix 4
4
A
175 177Right-handed 310
Helix 5
5
A
178 193Right-handed alpha
Helix 6
6
A
195 202Right-handed alpha
Helix 7
7
A
205 227Right-handed alpha
Helix 8
8
A
239 251Right-handed alpha
Helix 9
9
A
266 269Right-handed 310
Helix 10
10
A
270 282Right-handed alpha
Helix 11
11
A
286 290Right-handed 310
Helix 12
12
A
291 303Right-handed alpha
Helix 13
13
A
318 323Right-handed 310
Helix 14
14
A
326 331Right-handed 310
Helix 15
15
B
67 81Right-handed alpha
Helix 16
16
B
150 161Right-handed alpha
Helix 17
17
B
162 166Right-handed 310
Helix 18
18
B
175 177Right-handed 310
Helix 19
19
B
178 193Right-handed alpha
Helix 20
20
B
195 202Right-handed alpha
Helix 21
21
B
205 227Right-handed alpha
Helix 22
22
B
239 251Right-handed alpha
Helix 23
23
B
266 269Right-handed 310
Helix 24
24
B
270 282Right-handed alpha
Helix 25
25
B
286 290Right-handed 310
Helix 26
26
B
291 303Right-handed alpha
Helix 27
27
B
318 323Right-handed 310
Helix 28
28
B
326 331Right-handed 310
Helix 29
29
C
67 81Right-handed alpha
Helix 30
30
C
150 161Right-handed alpha
Helix 31
31
C
162 166Right-handed 310
Helix 32
32
C
175 177Right-handed 310
Helix 33
33
C
178 193Right-handed alpha
Helix 34
34
C
195 202Right-handed alpha
Helix 35
35
C
205 227Right-handed alpha
Helix 36
36
C
239 250Right-handed alpha
Helix 37
37
C
255 260Right-handed alpha
Helix 38
38
C
266 269Right-handed 310
Helix 39
39
C
270 282Right-handed alpha
Helix 40
40
C
286 290Right-handed 310
Helix 41
41
C
291 303Right-handed alpha
Helix 42
42
C
318 323Right-handed 310
Helix 43
43
C
326 331Right-handed 310
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There are 6 sheets in PDB entry 3M1G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
50 53parallel
Strand 3
A
43 44anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
59 63parallel
Strand 3
A
137 140anti-parallel
Strand 4
A
146 148anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 33first strand
Strand 2
B
50 53parallel
Strand 3
B
43 44anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 90first strand
Strand 2
B
59 63parallel
Strand 3
B
137 140anti-parallel
Strand 4
B
146 148anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 33first strand
Strand 2
C
50 53parallel
Strand 3
C
43 44anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 90first strand
Strand 2
C
59 63parallel
Strand 3
C
137 140anti-parallel
Strand 4
C
146 148anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il