Analysis of interatomic Contacts of Structural Units in PDB entry:
3M1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M1I entry

There are 3 chains in PDB entry 3M1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 10ALA 217
B
 LEU 71ALA 201
C
 GLY -1GLY 951
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3M1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 35Right-handed alpha
Helix 2
2
A
71 75Right-handed 310
Helix 3
3
A
77 83Right-handed 310
Helix 4
4
A
96 102Right-handed alpha
Helix 5
5
A
102 114Right-handed alpha
Helix 6
6
A
134 138Right-handed 310
Helix 7
7
A
140 145Right-handed alpha
Helix 8
8
A
160 172Right-handed alpha
Helix 9
9
A
199 208Right-handed alpha
Helix 10
10
B
180 200Right-handed alpha
Helix 11
11
C
-1 6Right-handed 310
Helix 12
12
C
12 26Right-handed alpha
Helix 13
13
C
27 44Right-handed alpha
Helix 14
14
C
46 49Right-handed 310
Helix 15
15
C
50 58Right-handed alpha
Helix 16
16
C
60 78Right-handed alpha
Helix 17
17
C
79 82Right-handed 310
Helix 18
18
C
83 104Right-handed alpha
Helix 19
19
C
104 111Right-handed alpha
Helix 20
20
C
111 130Right-handed alpha
Helix 21
21
C
136 146Right-handed alpha
Helix 22
22
C
148 168Right-handed alpha
Helix 23
23
C
175 204Right-handed alpha
Helix 24
24
C
206 221Right-handed alpha
Helix 25
25
C
226 231Right-handed alpha
Helix 26
26
C
233 240Right-handed alpha
Helix 27
27
C
240 245Right-handed alpha
Helix 28
28
C
245 262Right-handed alpha
Helix 29
29
C
268 290Right-handed alpha
Helix 30
30
C
296 304Right-handed alpha
Helix 31
31
C
307 332Right-handed alpha
Helix 32
32
C
333 335Right-handed 310
Helix 33
33
C
336 352Right-handed alpha
Helix 34
34
C
355 376Right-handed alpha
Helix 35
35
C
416 419Right-handed 310
Helix 36
36
C
420 434Right-handed alpha
Helix 37
37
C
458 479Right-handed alpha
Helix 38
38
C
479 496Right-handed alpha
Helix 39
39
C
501 515Right-handed alpha
Helix 40
40
C
520 539Right-handed alpha
Helix 41
41
C
544 562Right-handed alpha
Helix 42
42
C
562 569Right-handed alpha
Helix 43
43
C
569 584Right-handed alpha
Helix 44
44
C
588 607Right-handed alpha
Helix 45
45
C
607 612Right-handed alpha
Helix 46
46
C
620 628Right-handed alpha
Helix 47
47
C
628 634Right-handed alpha
Helix 48
48
C
637 654Right-handed alpha
Helix 49
49
C
657 669Right-handed alpha
Helix 50
50
C
669 686Right-handed alpha
Helix 51
51
C
687 691Right-handed 310
Helix 52
52
C
692 714Right-handed alpha
Helix 53
53
C
717 747Right-handed alpha
Helix 54
54
C
748 752Right-handed 310
Helix 55
55
C
753 777Right-handed alpha
Helix 56
56
C
779 787Right-handed alpha
Helix 57
57
C
787 802Right-handed alpha
Helix 58
58
C
803 808Right-handed 310
Helix 59
59
C
809 823Right-handed alpha
Helix 60
60
C
826 846Right-handed alpha
Helix 61
61
C
852 870Right-handed alpha
Helix 62
62
C
871 877Right-handed alpha
Helix 63
63
C
878 894Right-handed alpha
Helix 64
64
C
897 918Right-handed alpha
Helix 65
65
C
921 945Right-handed alpha
Helix 66
66
C
948 950Right-handed 310
Helix 67
67
C
951 968Right-handed alpha
Helix 68
68
C
977 981Right-handed 310
Helix 69
69
C
986 1003Right-handed alpha
Helix 70
70
C
1007 1021Right-handed alpha
Helix 71
71
C
1024 1040Right-handed alpha
Helix 72
72
C
1045 1055Right-handed 310
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There are 3 sheets in PDB entry 3M1I. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 56first strand
Strand 2
A
59 68anti-parallel
Strand 3
A
12 19parallel
Strand 4
A
87 93parallel
Strand 5
A
119 124parallel
Strand 6
A
147 150parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 139first strand
Strand 2
B
122 127anti-parallel
Strand 3
B
102 116anti-parallel
Strand 4
B
83 97anti-parallel
Strand 5
B
170 177anti-parallel
Strand 6
B
155 163anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
443 445first strand
Strand 2
C
451 453anti-parallel
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